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Issues: hms-dbmi/chromoscope

Support faster rendering of SV
#64 opened Aug 31, 2022 by sehilyi
Open 3
Clarify the use of chr prefix in documentation
#77 opened Dec 19, 2022 by sehilyi
Open 2
Get idea from IGV Google Cloud
#81 opened Jan 6, 2023 by sehilyi
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Issues list

Support custom tracks (e.g., bigwig, bed)
#56 opened Jul 29, 2022 by sehilyi updated Jul 29, 2022
Duplicated CNV segments sometimes
#59 opened Aug 5, 2022 by sehilyi updated Aug 5, 2022
SV type w/o strands --> "other" and grey colors
#65 opened Sep 2, 2022 by sehilyi updated Sep 2, 2022
Make brushes visible when showing a tiny region
#72 opened Oct 28, 2022 by sehilyi updated Oct 28, 2022
Zoom to chr2 does not show mutations at the very end of chr2
#74 opened Nov 4, 2022 by sehilyi updated Nov 4, 2022
Support faster rendering of SV
#64 opened Aug 31, 2022 by sehilyi updated Dec 9, 2022
3
LOH is different between linear and circular
#76 opened Dec 9, 2022 by sehilyi updated Dec 9, 2022
1
Get idea from IGV Google Cloud
#81 opened Jan 6, 2023 by sehilyi updated Jan 6, 2023
Mutation display
#80 opened Jan 5, 2023 by dominikglodzikhms updated Jan 13, 2023
3
Sometimes Chr2 does not work when zoomed in
#83 opened Jan 20, 2023 by sehilyi updated Jan 20, 2023
Show sequencing reads from the .bam file around a mutation
#84 opened Feb 24, 2023 by DominikGlodzik updated Feb 24, 2023
Upon clicking of a driver gene name in the circular view, jump linear view to the regions of the gene
#86 opened Feb 24, 2023 by DominikGlodzik updated Feb 24, 2023
Clarify the use of chr prefix in documentation documentation Improvements or additions to documentation
#77 opened Dec 19, 2022 by sehilyi updated Feb 28, 2023
2
Want to remove undefined on tooltips & addressing overlaps between drivers
#85 opened Feb 24, 2023 by vstevensf updated Mar 19, 2023
3
Adding more color legends and using distinct colors
#87 opened Feb 28, 2023 by dominikglodzikhms updated Mar 19, 2023
2
Things left for the Python package enhancement New feature or request
#98 opened Apr 21, 2023 by sehilyi updated May 10, 2023
1 of 3 tasks
4
Spanning read highlighting
#112 opened May 19, 2023 by dominikglodzikhms updated May 19, 2023
Address color legends overlapping on the circular view
#114 opened Jun 22, 2023 by sehilyi updated Jun 22, 2023
Explain better how to use Gosling Editor better
#118 opened Jul 21, 2023 by sehilyi updated Jul 21, 2023
Brushing is a bit tricky in Firefox
#119 opened Jul 28, 2023 by sehilyi updated Jul 28, 2023
Adjust the position of blue/grey highlighting around Gosling visualization
#120 opened Jul 28, 2023 by sehilyi updated Jul 28, 2023
WebGL: Lost Context (Web Crash issues)
#50 opened Jul 22, 2022 by sehilyi updated Oct 4, 2023
4
Python package: genome view not loaded
#104 opened Apr 28, 2023 by dmaziec updated Dec 13, 2023
6
Question about CRAM file support
#125 opened Jan 9, 2024 by skchronicles updated Jan 10, 2024
2
Can I use reference genomes from other species?
#124 opened Nov 20, 2023 by karen916 updated Feb 2, 2024
1
ProTip! What’s not been updated in a month: updated:<2025-02-23.