@@ -23,7 +23,7 @@ asciitree==0.3.3
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# via zarr
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asgiref == 3.7.2
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# via flask
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- async-timeout == 4.0.2 ; python_full_version < '3.11'
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+ async-timeout == 4.0.2
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# via aiohttp
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attrs == 21.4.0
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# via
@@ -35,7 +35,7 @@ blinker==1.9.0
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# via flask
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boto3 == 1.28.17
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# hubmap-commons
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botocore == 1.31.17
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# via
@@ -44,7 +44,7 @@ botocore==1.31.17
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# s3transfer
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certifi == 2023.7.22
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# via requests
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- cffi == 1.15.0 ; platform_python_implementation != 'PyPy'
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+ cffi == 1.15.0
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# via cryptography
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charset-normalizer == 2.0.12
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# via requests
@@ -58,10 +58,6 @@ cloudpickle==2.2.1
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# via
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# dask
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# distributed
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- colorama == 0.4.6 ; platform_system == 'Windows'
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- # via
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- # click
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- # tqdm
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contourpy == 1.1.0
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# via matplotlib
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cryptography == 43.0.1
@@ -76,37 +72,37 @@ dask==2024.2.1
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# ome-zarr
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distributed == 2024.2.1
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# via ome-zarr
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- fasteners == 0.17.3 ; sys_platform != 'emscripten'
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+ fasteners == 0.17.3
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# via zarr
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- flask == 3.1.0
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+ flask [ async ] == 3.1.0
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# hubmap-commons
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fonttools == 4.43.0
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# via matplotlib
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frozenlist == 1.3.0
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# via
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# aiohttp
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# aiosignal
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- fsspec == 2023.6.0
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+ fsspec [ s3 ] == 2023.6.0
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# via
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# dask
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# ome-zarr
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# portal-visualization
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# s3fs
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globus-sdk == 3.9.0
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# hubmap-commons
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h5py == 3.9.0
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# via
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# anndata
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# scanpy
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hubmap-api-py-client == 0.0.11
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- # via -r context/ requirements.in
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+ # via -r requirements.in
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hubmap-commons == 2.1.18
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# portal-visualization
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idna == 3.7
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# via
@@ -122,7 +118,7 @@ isodate==0.6.1
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# via rdflib
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itsdangerous == 2.2.0
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# via flask
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- jinja2 == 3.1.4
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+ jinja2 == 3.1.5
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# via
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# distributed
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# flask
@@ -160,7 +156,7 @@ locket==1.0.0
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# partd
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lxml == 4.9.1
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# prov
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markupsafe == 2.1.1
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# via
@@ -260,7 +256,7 @@ pillow==11.0.0
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platformdirs == 2.5.1
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# via black
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portal-visualization @ https://github.com/hubmapconsortium/portal-visualization/archive/refs/tags/0.3.8.zip
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- # via -r context/ requirements.in
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+ # via -r requirements.in
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propcache == 0.2.0
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# via yarl
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property == 2.2
@@ -269,9 +265,9 @@ prov==2.0.0
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# via hubmap-commons
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psutil == 5.9.8
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# via distributed
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- pycparser == 2.21 ; platform_python_implementation != 'PyPy'
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+ pycparser == 2.21
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# via cffi
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- pyjwt == 2.4.0
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+ pyjwt [ crypto ] == 2.4.0
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# via globus-sdk
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pynndescent == 0.5.10
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# via
@@ -285,7 +281,7 @@ pyrsistent==0.18.1
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# via jsonschema
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python-datauri == 2.2.0
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# portal-visualization
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python-dateutil == 2.8.2
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# via
@@ -294,19 +290,17 @@ python-dateutil==2.8.2
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# pandas
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# prov
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python-frontmatter == 1.1.0
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- # via -r context/ requirements.in
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+ # via -r requirements.in
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pytz == 2022.1
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# via
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# hubmap-commons
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# neo4j
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# pandas
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pywavelets == 1.4.1
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# via scikit-image
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- pywin32 == 308 ; platform_python_implementation != 'PyPy' and sys_platform == 'win32'
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- # via jupyter-core
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pyyaml == 6.0.1
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# dask
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# distributed
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# hubmap-commons
@@ -315,7 +309,7 @@ rdflib==6.1.1
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# via prov
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requests == 2.32.3
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# via
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- # -r context/ requirements.in
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+ # -r requirements.in
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# globus-sdk
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# hubmap-api-py-client
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# hubmap-commons
@@ -348,8 +342,6 @@ seaborn==0.13.2
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# via scanpy
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session-info == 1.0.0
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# via scanpy
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- setuptools == 75.6.0
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- # via rdflib
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six == 1.16.0
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# via
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# isodate
@@ -369,7 +361,7 @@ tifffile==2023.8.12
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# via
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# scikit-image
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# vitessce
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- tomli == 2.0.1 ; python_full_version < '3.11'
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+ tomli == 2.0.1
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# via black
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toolz == 0.12.0
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# via
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