VOS4 Release

Author: sharimayer

README.md

@@ -1,60 +1,26 @@
 # VICAR
 VICAR, which stands for Video Image Communication And Retrieval, is a general purpose image processing software system that has been developed since 1966 to digitally process multi-dimensional imaging data.
 
-We are pleased to announce that the VICAR Open Source Core version 3.0 is now available.
+We are pleased to announce that the VICAR Open Source Core version 4.0 is now available.
 Please visit the VICAR Open Source release homepage:
 
 [http://www-mipl.jpl.nasa.gov/vicar_open.html](http://www-mipl.jpl.nasa.gov/vicar_open.html).
 
 This release includes:
 
 - Pre-built binaries for 32- and 64-bit Linux(Red Hat 7.3) and Mac OS X 64-bit. 
-- A Docker Centos7 image that runs the 64-bit Linux binaries.
-- A Docker Centos7 image preloaded with VOS 64-bit Linux(Red Hat 7.3).
-- 24 new application programs: 
-classifier,
-clusterer,
-denoisetv,
-destripe,
-file2tcl,
-gamma,
-gtigeolo,
-gtlabfix,
-horizon,
-ibisclst2,
-ibisclst3,
-mooresc,
-randpixel,
-rgb2ish,
-sampler,
-sc2rpc,
-scinterp,
-shadow,
-shp2rast,
-tclmath,
-wedge,
-wnr2005,
-xyzpic2,
-zipcol2
-- 4 new application programs were added in Vicar Open Source Core version 2.0 but were not listed
-  previously:
-getzval,
-gtappend,
-gtmss,
-vtiff3o
-- 13 anomalies, 27 bug fixes/improvements.
-- The .com files for GUI,P1,P2,P3 have been unpacked and the .com files have been eliminated.
-  There is a subdirectory per application, with all of that application's files.	
-- A new plugin that enables GDAL reading and writing of VICAR image files. 
-- New Use Case Examples:
-	* Landsat 7 Mosaic
-	* SRTM Mosaic
-	* Landsat 8 Multi-Spectral Analysis
-	* Landsat 8 Pan Sharpening
-	* Using ISIS with VICAR to Process Galileo Europa Imagery
-	* Neptune’s Satellite Proteus
-
-For a full list of programs being released [click here](vos/docsource/vicar/VICAR_OS_contents_v3.0.pdf).
+- A Docker Centos7 image that runs the 64-bit Linux binaries (Java 1.8).
+- A Docker Centos7 image preloaded with VOS 64-bit Linux(Red Hat 7.3) using Java 1.8.
+- 6 new application programs: 
+  avgpix 
+  comprs 
+  crosshair 
+  medval
+  nimsr2iof 
+  sdsems
+- 19 anomalies, 72 bug fixes/improvements. For a full list, [click here](vos/docsource/vicar/VOS4-Release-Notes.pdf).
+
+For a full list of programs being released [click here](vos/docsource/vicar/VICAR_OS_contents_v4.0.pdf).
 
 ## VICAR Discussion Forum
 
@@ -65,24 +31,24 @@ We have set up a [VICAR Open Source Google group](https://groups.google.com/foru
 The VICAR source code can be obtained via github.com using the links below. In addition to the VICAR source code an externals package containing 3rd party software is required. 
 
 Note that for externals you'll find a tarball that contains all the platforms, as
-well as separate ones for each platform. Externals are 3rd party packages that are required to run VICAR. See section 2 of the [Building VICAR document](vos/docsource/vicar/VICAR_build_3.0.pdf) for more information. You need only the one that
+well as separate ones for each platform. Externals are 3rd party packages that are required to run VICAR. See section 2 of the [Building VICAR document](vos/docsource/vicar/VICAR_build_4.0.pdf) for more information. You need only the one that
 applies to your machine type.
 
 Pre-built VICAR binaries are available at https://github.com/nasa/VICAR/releases.
 
 #### Tarballs
 
-* Main VICAR source code:  [Click to download](https://github.com/nasa/VICAR/tarball/master)
-* Linux 32-bit externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v3.0/vicar_open_ext_x86-linux_3.0.tar.gz)
-* Linux 64-bit externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v3.0/vicar_open_ext_x86-64-linx_3.0.tar.gz)
-* Mac OS X externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v3.0/vicar_open_ext_mac64-osx_3.0.tar.gz)
-* Solaris externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v3.0/vicar_open_ext_sun-solr_3.0.tar.gz)
-* All externals (don't get unless you know you need this): [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v3.0/vicar_open_ext_3.0.tar.gz)
+* Main VICAR source code:  [Click to download](https://github.com/NASA-AMMOS/VICAR/tarball/master)
+* Linux 32-bit externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v4.0/vicar_open_ext_x86-linux_4.0.tar.gz)
+* Linux 64-bit externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v4.0/vicar_open_ext_x86-64-linx_4.0.tar.gz)
+* Mac OS X externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v4.0/vicar_open_ext_mac64-osx_4.0.tar.gz)
+* Solaris externals:  [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v4.0/vicar_open_ext_sun-solr_4.0.tar.gz)
+* All externals (don't get unless you know you need this): [Click to download](http://www-mipl.jpl.nasa.gov/vicar_os/v4.0/vicar_open_ext_4.0.tar.gz)
 
 ## Using VICAR
 
-* The VICAR installation guide can be found [here](vos/docsource/vicar/VICAR_build_3.0.pdf).
-* The VICAR quick-start guide can be found [here](vos/docsource/vicar/VICAR_guide_3.0.pdf).
+* The VICAR installation guide can be found [here](vos/docsource/vicar/VICAR_build_4.0.pdf).
+* The VICAR quick-start guide can be found [here](vos/docsource/vicar/VICAR_guide_4.0.pdf).
 
 
 Questions:  vicar_help@jpl.nasa.gov

vos/build_open_vicar_sol.csh

@@ -0,0 +1,76 @@
+#!/bin/csh
+#
+# Build the Open Source version of VICAR
+#
+# PREREQUISITE:
+#   setenv V2TOP /directory/containing/vicar
+#
+# V2TOP should point to the directory containing "vicset1.source" among
+# other things.  The parent directory should contain the externals (vos-ext*
+# directory).  You should avoid upper-case letters in the path if possible.
+# If needed you can create a softlink alias to vicar, e.g.:
+#
+# sudo ln -s /Users/username/vicar /usr/local/vicar
+# setenv V2TOP /usr/local/vicar/vos
+#
+
+echo "**********************************************************"
+echo "*** VICAR OPEN SOURCE BUILD LOG"
+echo "**********************************************************"
+
+unalias rm
+unalias mv
+unalias cp
+unset noclobber
+
+# Create vicset1.csh
+
+cd $V2TOP
+echo "creating vicset1.csh"
+util/process_project_file.csh vicset1.source PROJ_OS > vicset1.csh
+source $V2TOP/vicset1.csh
+source $V2TOP/vicset2.csh
+
+# Prep the build
+
+echo "util/prep.csh"
+util/prep.csh
+echo "util/fetch_tae.csh"
+util/fetch_tae.csh >& log1
+
+source $V2TOP/vicset1.csh
+make -f imakefile.vicar Makefile
+
+echo "**********************************************************"
+echo "*** BUILDING TAE"
+echo "**********************************************************"
+
+source $V2TOP/vicset1.csh
+make -f Makefile.$VICCPU tae >& build_tae_$VICCPU.log
+util/setup-indep.csh
+
+# Build first part of VICAR
+
+source $V2TOP/vicset1.csh	
+make -f Makefile.$VICCPU opens1 >& build_opens1_$VICCPU.log
+
+echo "**********************************************************"
+echo "*** BUILDING JAVA"
+echo "**********************************************************"
+
+source $V2TOP/vicset1.csh
+util/java_build.csh >& build_java.log
+
+echo "**********************************************************"
+echo "*** BUILDING VICAR PART 2"
+echo "**********************************************************"
+
+source $V2TOP/vicset1.csh
+make -f Makefile.$VICCPU opens2 >& build_opens2_$VICCPU.log
+
+
+make -f Makefile.$VICCPU tae52 |& tee build_tae52_$VICCPU.log
+
+echo "Done with VICAR build!  Check log for errors."
+
+

vos/config/mac64_osx.cf

@@ -20,13 +20,13 @@
 #   Targets for Integrated VICAR Build
 #
 all: make_dirs make_util make_stae make_shvic make_rtl make_gdalplugin make_vrdi make_motifapp
-all: make_mdms make_fei5 make_subs make_crumbs make_progs make_vids make_done 
+all: make_subs make_crumbs make_progs make_vids make_done 
 
 # split build into two builds because java has to be built after rtl and before gui 
 # Java can be built on solr or linux platforms. 
 
 v1: make_dirs make_util make_docs make_stae make_shvic make_rtl make_gdalplugin
-v2: make_vrdi make_motifapp make_mdms make_fei5 make_subs make_crumbs make_progs make_vids make_done
+v2: make_vrdi make_motifapp make_subs make_crumbs make_progs make_vids make_done
 
 #
 # Target for Open Source Build 
@@ -43,31 +43,25 @@ opensall: make_opensubs make_opensprogs make_vids make_done
 #
 
 core1: make_dirs make_util make_docs make_stae make_shvic make_rtl make_gdalplugin
-core2: make_vrdi make_motifapp make_mdms make_fei5 make_coresubs make_crumbs make_coreprogs make_vids make_done
+core2: make_vrdi make_motifapp make_coresubs make_crumbs make_coreprogs make_vids make_done
 
 coreall: make_dirs make_util make_stae make_shvic make_rtl make_gdalplugin make_vrdi make_motifapp
-coreall: make_mdms make_fei5 make_coresubs make_crumbs make_coreprogs make_vids make_done        
+coreall: make_coresubs make_crumbs make_coreprogs make_vids make_done        
 
 # Targets for Project Specific Builds
 #
 
-cas1:  make_dirs make_util make_docs make_stae make_shvic make_rtl
-cas2:  make_vrdi make_motifapp make_mdms make_fei5 make_subs make_progs make_done
-
-caslinux:  make_dirs make_util make_stae make_shvic make_rtl make_vrdi make_motifapp
-caslinux:  make_mdms make_fei5 make_subs make_progs make_done
-
 div1:  make_dirs make_util make_stae make_shvic make_rtl
 div2:  make_motifapp make_mdms make_p1 make_p2 make_div make_done
 
 divall:  make_dirs make_util make_stae make_shvic make_rtl 
 divall:  make_motifapp make_mdms make_p1 make_p2 make_div make_done
 
 mars1:  make_dirs make_util make_docs make_stae make_shvic make_rtl make_gdalplugin
-mars2:  make_vrdi make_motifapp make_mdms make_marssubs make_crumbs make_marsprogs make_vids make_done
+mars2:  make_vrdi make_motifapp make_marssubs make_crumbs make_marsprogs make_vids make_done
 
 marsall:  make_dirs make_util make_stae make_shvic make_rtl make_gdalplugin make_vrdi make_motifapp
-marsall:  make_mdms make_marssubs make_marsprogs make_vids make_done
+marsall:  make_marssubs make_crumbs make_marsprogs make_vids make_done
 
 phx1:  make_dirs make_util make_docs make_stae make_shvic make_rtl
 phx2:  make_vrdi make_motifapp make_mdms make_marssubs make_marsprogs make_vids make_done
@@ -89,10 +83,10 @@ dlr: make_dirs make_util make_stae make_shvic make_rtl make_motifapp
 dlr: make_subs make_progs make_done
 
 nsyt1: make_dirs make_util make_docs make_stae make_shvic make_rtl make_gdalplugin
-nsyt2: make_vrdi make_motifapp make_fileservice make_marssubs make_crumbs make_marsprogs make_vids make_done
+nsyt2: make_vrdi make_motifapp make_marssubs make_crumbs make_marsprogs make_vids make_done
 
 nsytall: make_dirs make_util make_stae make_shvic make_rtl make_gdalplugin make_vrdi make_motifapp
-nsytall: make_fileservice make_marssubs make_crumbs make_marsprogs make_vids make_done
+nsytall: make_marssubs make_crumbs make_marsprogs make_vids make_done
 
 #
 
@@ -175,10 +169,6 @@ make_motifapp:
 make_mdms:
 	-($(CD) $(V2TOP)/mdms/source/umake; make -f  makefile.mdms $(VICCPU))
 
-make_fei5:
-	-($(CD) $(V2TOP)/fei5; $(VSYSIMAKE) -f imakefile.fei5 -s Makefile.$(VICCPU))
-	-($(CD) $(V2TOP)/fei5; $(MAKE) Makefile.$(VICCPU))
-
 make_fileservice:
 	-($(CD) $(V2TOP)/mdms/source/FileService; make -f makefile.FileService)
 
@@ -198,9 +188,6 @@ make_p2:
 	($(CD) $(V2TOP)/p2; $(VSYSIMAKE) -f imakefile.p2 -s Makefile.$(VICCPU))
 	($(CD) $(V2TOP)/p2; $(MAKE) Makefile.$(VICCPU))
 
-make_cas:
-	($(CD) $(V2TOP)/cas; $(VSYSIMAKE) -f imakefile.cas -s Makefile.$(VICCPU))
-	($(CD) $(V2TOP)/cas; $(MAKE) Makefile.$(VICCPU))
 make_p3:
 	($(CD) $(V2TOP)/p3; $(VSYSIMAKE) -f imakefile.p3 -s Makefile.$(VICCPU))
 	($(CD) $(V2TOP)/p3; $(MAKE) Makefile.$(VICCPU))