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chore(rebuild): Merge pull request ome#57 from constantinpape/axes-spec
Extend the axes fields in multiscales metadata SHA: 90de9f1 Reason: push, by @bogovicj Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
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* - .toc for the Table of Contents (<ol class="toc">)
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* - ul.index for Indices (<a href="#ref">term</a><span>, in §N.M</span>)
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<img alt="OME logo (6 circles in a hexagon)" src="http://www.openmicroscopy.org/img/logos/ome-logomark.svg" style="float:right;width:42px;height:42px;">
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<h1 class="p-name no-ref" id="title">Next-generation file formats (NGFF)</h1>
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<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2021-08-03">3 August 2021</time></span></h2>
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<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2022-02-01">1 February 2022</time></span></h2>
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<p class="copyright" data-fill-with="copyright">Copyright © 2021 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
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<p class="copyright" data-fill-with="copyright">Copyright © 2022 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
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and are not intended to be performant.
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<h2 class="no-num no-ref heading settled" id="index"><span class="content">Index</span><a class="self-link" href="#index"></a></h2>
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<h3 class="no-num no-ref heading settled" id="index-defined-here"><span class="content">Terms defined by this specification</span><a class="self-link" href="#index-defined-here"></a></h3>
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<ul class="index">
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<li><a href="#hdf5">HDF5</a><span>, in §1.1</span>
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<li><a href="#ngff">NGFF</a><span>, in §1.1</span>
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<li><a href="#hdf5">HDF5</a><span>, in §1.1</span>
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<li><a href="#ngff">NGFF</a><span>, in §1.1</span>
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<h2 class="no-num no-ref heading settled" id="references"><span class="content">References</span><a class="self-link" href="#references"></a></h2>
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<h3 class="no-num no-ref heading settled" id="normative"><span class="content">Normative References</span><a class="self-link" href="#normative"></a></h3>
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<dt id="biblio-rfc2119">[RFC2119]
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<dd>S. Bradner. <a href="https://datatracker.ietf.org/doc/html/rfc2119">Key words for use in RFCs to Indicate Requirement Levels</a>. March 1997. Best Current Practice. URL: <a href="https://datatracker.ietf.org/doc/html/rfc2119">https://datatracker.ietf.org/doc/html/rfc2119</a>
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<dd>S. Bradner. <a href="https://datatracker.ietf.org/doc/html/rfc2119"><cite>Key words for use in RFCs to Indicate Requirement Levels</cite></a>. March 1997. Best Current Practice. URL: <a href="https://datatracker.ietf.org/doc/html/rfc2119">https://datatracker.ietf.org/doc/html/rfc2119</a>
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<h3 class="no-num no-ref heading settled" id="informative"><span class="content">Informative References</span><a class="self-link" href="#informative"></a></h3>
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<dt id="biblio-n5">[N5]
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<dd>John A. Bogovic; et al. <a href="https://github.com/saalfeldlab/n5/issues/62">N5---a scalable Java API for hierarchies of chunked n-dimensional tensors and structured meta-data</a>. 2020. Informational. URL: <a href="https://github.com/saalfeldlab/n5/issues/62">https://github.com/saalfeldlab/n5/issues/62</a>
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<dd>John A. Bogovic; et al. <a href="https://github.com/saalfeldlab/n5/issues/62"><cite>N5---a scalable Java API for hierarchies of chunked n-dimensional tensors and structured meta-data</cite></a>. 2020. Informational. URL: <a href="https://github.com/saalfeldlab/n5/issues/62">https://github.com/saalfeldlab/n5/issues/62</a>
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<dt id="biblio-ome-zarr-py">[OME-ZARR-PY]
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<dd>OME; et al. <a href="https://doi.org/10.5281/zenodo.4113931">ome-zarr-py: Experimental implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.</a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4113931">https://doi.org/10.5281/zenodo.4113931</a>
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<dd>OME; et al. <a href="https://doi.org/10.5281/zenodo.4113931"><cite>ome-zarr-py: Experimental implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.</cite></a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4113931">https://doi.org/10.5281/zenodo.4113931</a>
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<dt id="biblio-zarr">[ZARR]
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<dd>Alistair Miles; et al. <a href="https://doi.org/10.5281/zenodo.4069231">Zarr: An implementation of chunked, compressed, N-dimensional arrays for Python.</a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4069231">https://doi.org/10.5281/zenodo.4069231</a>
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<dd>Alistair Miles; et al. <a href="https://doi.org/10.5281/zenodo.4069231"><cite>Zarr: An implementation of chunked, compressed, N-dimensional arrays for Python.</cite></a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4069231">https://doi.org/10.5281/zenodo.4069231</a>
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0.2/index.html

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<h1 class="p-name no-ref" id="title">Next-generation file formats (NGFF)</h1>
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<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2021-08-03">3 August 2021</time></span></h2>
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<h2 class="no-num no-toc no-ref heading settled" id="subtitle"><span class="content">Final Community Group Report, <time class="dt-updated" datetime="2022-02-01">1 February 2022</time></span></h2>
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<p class="copyright" data-fill-with="copyright">Copyright © 2021 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
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<p class="copyright" data-fill-with="copyright">Copyright © 2022 <a href="https://www.openmicroscopy.org/"><abbr title="Open Microscopy Environment">OME</abbr></a><sup>®</sup> (<a href="https://dundee.ac.uk/"><abbr title="University of Dundee">U. Dundee</abbr></a>).
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<dd>S. Bradner. <a href="https://datatracker.ietf.org/doc/html/rfc2119">Key words for use in RFCs to Indicate Requirement Levels</a>. March 1997. Best Current Practice. URL: <a href="https://datatracker.ietf.org/doc/html/rfc2119">https://datatracker.ietf.org/doc/html/rfc2119</a>
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<dd>S. Bradner. <a href="https://datatracker.ietf.org/doc/html/rfc2119"><cite>Key words for use in RFCs to Indicate Requirement Levels</cite></a>. March 1997. Best Current Practice. URL: <a href="https://datatracker.ietf.org/doc/html/rfc2119">https://datatracker.ietf.org/doc/html/rfc2119</a>
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<dd>John A. Bogovic; et al. <a href="https://github.com/saalfeldlab/n5/issues/62">N5---a scalable Java API for hierarchies of chunked n-dimensional tensors and structured meta-data</a>. 2020. Informational. URL: <a href="https://github.com/saalfeldlab/n5/issues/62">https://github.com/saalfeldlab/n5/issues/62</a>
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<dd>John A. Bogovic; et al. <a href="https://github.com/saalfeldlab/n5/issues/62"><cite>N5---a scalable Java API for hierarchies of chunked n-dimensional tensors and structured meta-data</cite></a>. 2020. Informational. URL: <a href="https://github.com/saalfeldlab/n5/issues/62">https://github.com/saalfeldlab/n5/issues/62</a>
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<dt id="biblio-ome-zarr-py">[OME-ZARR-PY]
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<dd>OME; et al. <a href="https://doi.org/10.5281/zenodo.4113931">ome-zarr-py: Experimental implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.</a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4113931">https://doi.org/10.5281/zenodo.4113931</a>
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<dd>OME; et al. <a href="https://doi.org/10.5281/zenodo.4113931"><cite>ome-zarr-py: Experimental implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.</cite></a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4113931">https://doi.org/10.5281/zenodo.4113931</a>
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<dt id="biblio-zarr">[ZARR]
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<dd>Alistair Miles; et al. <a href="https://doi.org/10.5281/zenodo.4069231">Zarr: An implementation of chunked, compressed, N-dimensional arrays for Python.</a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4069231">https://doi.org/10.5281/zenodo.4069231</a>
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<dd>Alistair Miles; et al. <a href="https://doi.org/10.5281/zenodo.4069231"><cite>Zarr: An implementation of chunked, compressed, N-dimensional arrays for Python.</cite></a>. 06 October 2020. Informational. URL: <a href="https://doi.org/10.5281/zenodo.4069231">https://doi.org/10.5281/zenodo.4069231</a>
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