1_setting_up.Rmd

# Install CRAN packages

```{r, eval=FALSE}
# restart R
.rs.restartR()

# install packages
install.packages(c("devtools", "tidyverse", "plotly", "latex2exp"))
```

# Install GitHub packages

```{r, eval=FALSE}
# install isoreader
devtools::install_github("isoverse/isoreader")

# install isoprocessor
devtools::install_github("isoverse/isoprocessor")


```

# Check versions

```{r}
# R version
getRversion()

# key tidyverse package versions
packageVersion("dplyr")
packageVersion("ggplot2")
packageVersion("tidyr")

# isoverse versions
packageVersion("isoreader")
packageVersion("isoprocessor")
```