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CMakeLists.txt
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######################################################################
# CMakeLists.txt - cmake build file for make to create CBFlib #
# #
# Version 0.9.6 06 November 2018 #
# #
# Paul Ellis and #
# Herbert J. Bernstein (yaya@bernstein-plus-sons.com) #
# #
# (C) Copyright 2006 - 2018 Herbert J. Bernstein #
# #
######################################################################
######################################################################
# #
# YOU MAY REDISTRIBUTE THE CBFLIB PACKAGE UNDER THE TERMS OF THE GPL #
# #
# ALTERNATIVELY YOU MAY REDISTRIBUTE THE CBFLIB API UNDER THE TERMS #
# OF THE LGPL #
# #
######################################################################
########################### GPL NOTICES ##############################
# #
# This program is free software; you can redistribute it and/or #
# modify it under the terms of the GNU General Public License as #
# published by the Free Software Foundation; either version 2 of #
# (the License, or (at your option) any later version. #
# #
# This program is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
# GNU General Public License for more details. #
# #
# You should have received a copy of the GNU General Public License #
# along with this program; if not, write to the Free Software #
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA #
# 02111-1307 USA #
# #
######################################################################
######################### LGPL NOTICES ###############################
# #
# This library is free software; you can redistribute it and/or #
# modify it under the terms of the GNU Lesser General Public #
# License as published by the Free Software Foundation; either #
# version 2.1 of the License, or (at your option) any later version. #
# #
# This library is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU #
# Lesser General Public License for more details. #
# #
# You should have received a copy of the GNU Lesser General Public #
# License along with this library; if not, write to the Free #
# Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, #
# MA 02110-1301 USA #
# #
######################################################################
######################################################################
# #
# Stanford University Notices #
# for the CBFlib software package that incorporates SLAC software #
# on which copyright is disclaimed #
# #
# This software #
# ------------- #
# The term "this software", as used in these Notices, refers to #
# those portions of the software package CBFlib that were created by #
# employees of the Stanford Linear Accelerator Center, Stanford #
# University. #
# #
# Stanford disclaimer of copyright #
# -------------------------------- #
# Stanford University, owner of the copyright, hereby disclaims its #
# copyright and all other rights in this software. Hence, anyone #
# may freely use it for any purpose without restriction. #
# #
# Acknowledgement of sponsorship #
# ------------------------------ #
# This software was produced by the Stanford Linear Accelerator #
# Center, Stanford University, under Contract DE-AC03-76SFO0515 with #
# the Department of Energy. #
# #
# Government disclaimer of liability #
# ---------------------------------- #
# Neither the United States nor the United States Department of #
# Energy, nor any of their employees, makes any warranty, express or #
# implied, or assumes any legal liability or responsibility for the #
# accuracy, completeness, or usefulness of any data, apparatus, #
# product, or process disclosed, or represents that its use would #
# not infringe privately owned rights. #
# #
# Stanford disclaimer of liability #
# -------------------------------- #
# Stanford University makes no representations or warranties, #
# express or implied, nor assumes any liability for the use of this #
# software. #
# #
# Maintenance of notices #
# ---------------------- #
# In the interest of clarity regarding the origin and status of this #
# software, this and all the preceding Stanford University notices #
# are to remain affixed to any copy or derivative of this software #
# made or distributed by the recipient and are to be affixed to any #
# copy of software made or distributed by the recipient that #
# contains a copy or derivative of this software. #
# #
# Based on SLAC Software Notices, Set 4 #
# OTT.002a, 2004 FEB 03 #
######################################################################
######################################################################
# NOTICE #
# Creative endeavors depend on the lively exchange of ideas. There #
# are laws and customs which establish rights and responsibilities #
# for authors and the users of what authors create. This notice #
# is not intended to prevent you from using the software and #
# documents in this package, but to ensure that there are no #
# misunderstandings about terms and conditions of such use. #
# #
# Please read the following notice carefully. If you do not #
# understand any portion of this notice, please seek appropriate #
# professional legal advice before making use of the software and #
# documents included in this software package. In addition to #
# whatever other steps you may be obliged to take to respect the #
# intellectual property rights of the various parties involved, if #
# you do make use of the software and documents in this package, #
# please give credit where credit is due by citing this package, #
# its authors and the URL or other source from which you obtained #
# it, or equivalent primary references in the literature with the #
# same authors. #
# #
# Some of the software and documents included within this software #
# package are the intellectual property of various parties, and #
# placement in this package does not in any way imply that any #
# such rights have in any way been waived or diminished. #
# #
# With respect to any software or documents for which a copyright #
# exists, ALL RIGHTS ARE RESERVED TO THE OWNERS OF SUCH COPYRIGHT. #
# #
# Even though the authors of the various documents and software #
# found here have made a good faith effort to ensure that the #
# documents are correct and that the software performs according #
# to its documentation, and we would greatly appreciate hearing of #
# any problems you may encounter, the programs and documents any #
# files created by the programs are provided **AS IS** without any *
# warranty as to correctness, merchantability or fitness for any #
# particular or general use. #
# #
# THE RESPONSIBILITY FOR ANY ADVERSE CONSEQUENCES FROM THE USE OF #
# PROGRAMS OR DOCUMENTS OR ANY FILE OR FILES CREATED BY USE OF THE #
# PROGRAMS OR DOCUMENTS LIES SOLELY WITH THE USERS OF THE PROGRAMS #
# OR DOCUMENTS OR FILE OR FILES AND NOT WITH AUTHORS OF THE #
# PROGRAMS OR DOCUMENTS. #
######################################################################
######################################################################
# #
# The IUCr Policy #
# for the Protection and the Promotion of the STAR File and #
# CIF Standards for Exchanging and Archiving Electronic Data #
# #
# Overview #
# #
# The Crystallographic Information File (CIF)[1] is a standard for #
# information interchange promulgated by the International Union of #
# Crystallography (IUCr). CIF (Hall, Allen & Brown, 1991) is the #
# recommended method for submitting publications to Acta #
# Crystallographica Section C and reports of crystal structure #
# determinations to other sections of Acta Crystallographica #
# and many other journals. The syntax of a CIF is a subset of the #
# more general STAR File[2] format. The CIF and STAR File approaches #
# are used increasingly in the structural sciences for data exchange #
# and archiving, and are having a significant influence on these #
# activities in other fields. #
# #
# Statement of intent #
# #
# The IUCr's interest in the STAR File is as a general data #
# interchange standard for science, and its interest in the CIF, #
# a conformant derivative of the STAR File, is as a concise data #
# exchange and archival standard for crystallography and structural #
# science. #
# #
# Protection of the standards #
# #
# To protect the STAR File and the CIF as standards for #
# interchanging and archiving electronic data, the IUCr, on behalf #
# of the scientific community, #
# #
# # holds the copyrights on the standards themselves, *
# #
# # owns the associated trademarks and service marks, and *
# #
# # holds a patent on the STAR File. *
# #
# These intellectual property rights relate solely to the #
# interchange formats, not to the data contained therein, nor to #
# the software used in the generation, access or manipulation of #
# the data. #
# #
# Promotion of the standards #
# #
# The sole requirement that the IUCr, in its protective role, #
# imposes on software purporting to process STAR File or CIF data #
# is that the following conditions be met prior to sale or #
# distribution. #
# #
# # Software claiming to read files written to either the STAR *
# File or the CIF standard must be able to extract the pertinent #
# data from a file conformant to the STAR File syntax, or the CIF #
# syntax, respectively. #
# #
# # Software claiming to write files in either the STAR File, or *
# the CIF, standard must produce files that are conformant to the #
# STAR File syntax, or the CIF syntax, respectively. #
# #
# # Software claiming to read definitions from a specific data *
# dictionary approved by the IUCr must be able to extract any #
# pertinent definition which is conformant to the dictionary #
# definition language (DDL)[3] associated with that dictionary. #
# #
# The IUCr, through its Committee on CIF Standards, will assist #
# any developer to verify that software meets these conformance #
# conditions. #
# #
# Glossary of terms #
# #
# [1] CIF: is a data file conformant to the file syntax defined #
# at http://www.iucr.org/iucr-top/cif/spec/index.html #
# #
# [2] STAR File: is a data file conformant to the file syntax #
# defined at http://www.iucr.org/iucr-top/cif/spec/star/index.html #
# #
# [3] DDL: is a language used in a data dictionary to define data #
# items in terms of "attributes". Dictionaries currently approved #
# by the IUCr, and the DDL versions used to construct these #
# dictionaries, are listed at #
# http://www.iucr.org/iucr-top/cif/spec/ddl/index.html #
# #
# Last modified: 30 September 2000 #
# #
# IUCr Policy Copyright (C) 2000 International Union of #
# Crystallography #
######################################################################
######################################################################
# CMakeLists.txt for CBFlib #
# #
# Assumed directory structure #
# CBFlib_SOURCE_DIR CBFlib kit containing this file #
# doc Directory with documentation #
# examples Directory with example programs #
# include Directory with header files #
# m4 Directory with m4 files #
# src Directory with source files #
# #
# CBFlib_BINARY_DIR CBFlib build directory #
# usually ${CBFlib_SOURCE_DIR}/build #
# external_packages Directory for HDF5, libtiff, etc. #
# hdf5-1.8.11 #
# tiff-3.9.4-rev-6Feb11 #
# regex-20090805 #
# zlib-1.2.8 #
# data_files Directory for test files #
# bin Directory for executable programs #
# include Directory with build-created headers #
# src Directory with build-created source #
# #
######################################################################
cmake_minimum_required(VERSION 2.8)
if(COMMAND cmake_policy)
cmake_policy(SET CMP0003 NEW)
endif(COMMAND cmake_policy)
# Set timestamps of extracted contents to the time of extraction.
# Resolved by explicitly setting DOWNLOAD_EXTRACT_TIMESTAMP in
# externalproject_add() or fetchcontent_declare(), but the option was
# only introduced in CMake 3.24.
cmake_policy(SET CMP0135 NEW)
set(CBF_USE_FORTRAN_ENV $ENV{CBF_USE_FORTRAN})
set(CBF_F90FLAGS_ENV $ENV{F90FLAGS})
set(CBF_USE_ULP $ENV{CBF_USE_ULP})
set(CBF_M4FLAGS_ENV $ENV{M4FLAGS})
set(CBF_HDF5REGISTER_MANUAL_ENV $ENV{CBF_HDF5REGISTER_MANUAL})
if (CBF_USE_FORTRAN_ENV STREQUAL "NO")
project (CBFlib C CXX)
set(CBF_HDF5_ENABLE_FORTRAN "no")
else (CBF_USE_FORTRAN_ENV STREQUAL "NO")
project (CBFlib C CXX Fortran)
set(CBF_HDF5_ENABLE_FORTRAN "yes")
endif (CBF_USE_FORTRAN_ENV STREQUAL "NO")
enable_testing()
set (CBF_CMAKE_DEBUG "ON")
if (CBF_USE_ULP STREQUAL "YES")
set(CMAKE_C_FLAGS "-Wall -g -fno-strict-aliasing -DCBF_USE_ULP")
else (CBF_USE_ULP STREQUAL "YES")
set(CMAKE_C_FLAGS "-Wall -g -fno-strict-aliasing")
endif (CBF_USE_ULP STREQUAL "YES")
#
# User setable parameters
#
if (CBF_M4FLAGS_ENV)
set(CBF_M4FLAGS ${CBF_M4FLAGS_ENV})
else (CBF_M4FLAGS_ENV)
set(CBF_M4FLAGS "-Dfcb_bytes_in_rec=4096")
endif (CBF_M4FLAGS_ENV)
if (NOT (CBF_USE_FORTRAN_ENV STREQUAL "NO"))
if (CBF_F90FLAGS_ENV)
set(CMAKE_Fortran_FLAGS_RELEASE "${CMAKE_Fortran_FLAGS_RELEASE} ${CBF_F90FLAGS_ENV}")
set(CMAKE_Fortran_FLAGS_DEBUG "${CMAKE_Fortran_FLAGS_DEBUG} ${CBF_F90FLAGS_ENV}")
else (CBF_F90FLAGS_ENV)
set(CMAKE_Fortran_FLAGS_RELEASE "${CMAKE_Fortran_FLAGS_RELEASE} -fno-range-check")
set(CMAKE_Fortran_FLAGS_DEBUG "${CMAKE_Fortran_FLAGS_DEBUG} -fno-range-check")
endif (CBF_F90FLAGS_ENV)
endif (NOT (CBF_USE_FORTRAN_ENV STREQUAL "NO"))
# make sure that the default is a RELEASE
if (NOT CMAKE_BUILD_TYPE)
set (CMAKE_BUILD_TYPE RELEASE CACHE STRING
"Choose the type of build, options are: None Debug Release."
FORCE)
endif (NOT CMAKE_BUILD_TYPE)
#
# Favor static libraries
#
IF(WIN32)
SET(CMAKE_FIND_LIBRARY_SUFFIXES .lib .a ${CMAKE_FIND_LIBRARY_SUFFIXES})
ELSE(WIN32)
SET(CMAKE_FIND_LIBRARY_SUFFIXES .a ${CMAKE_FIND_LIBRARY_SUFFIXES})
ENDIF(WIN32)
#
# Macros
#
#
# CBF_DEBUG_MESSAGE if CBF_CMAKE_DEBUG issue str
#
macro(CBF_DEBUG_MESSAGE str)
if(CBF_CMAKE_DEBUG)
message(STATUS ${str})
endif(CBF_CMAKE_DEBUG)
endmacro (CBF_DEBUG_MESSAGE)
#
# CBF_REQUIRE_DIRECTORY -- require directory dir
#
macro(CBF_REQUIRE_DIRECTORY dir)
if (NOT EXISTS "${dir}")
file(MAKE_DIRECTORY "${dir}")
CBF_DEBUG_MESSAGE("Created directory ${dir}")
endif (NOT EXISTS "${dir}")
endmacro(CBF_REQUIRE_DIRECTORY)
#
# CBF_LOAD_TARBALL -- load TARBALL into WORK_DIR as UNPACKED_DIRECTORY
# Use an absolute path for UNPACKED_DIRECTORY
#
macro(CBF_LOAD_TARBALL WORK_DIR UNPACKED_DIRECTORY TARBALL)
if (NOT EXISTS ${UNPACKED_DIRECTORY})
execute_process(
COMMAND ${WGET_EXECUTABLE} ${TARBALL}
ERROR_QUIET
WORKING_DIRECTORY ${WORK_DIR}
)
execute_process(
COMMAND ${CMAKE_COMMAND} -E tar xzvf ${UNPACKED_DIRECTORY}.tar.gz
OUTPUT_QUIET
WORKING_DIRECTORY ${WORK_DIR}
)
execute_process(
COMMAND ${CMAKE_COMMAND} -E remove ${UNPACKED_DIRECTORY}.tar.gz
WORKING_DIRECTORY ${WORK_DIR}
)
endif (NOT EXISTS ${UNPACKED_DIRECTORY})
endmacro(CBF_LOAD_TARBALL)
#
# Directories
#
#
# Directories on the kit side
#
set(CBF__SRC "${CBFlib_SOURCE_DIR}/src" )
set(CBF__INCLUDE "${CBFlib_SOURCE_DIR}/include" )
set(CBF__M4 "${CBFlib_SOURCE_DIR}/m4" )
set(CBF__DOC "${CBFlib_SOURCE_DIR}/doc" )
set(CBF__EXAMPLES "${CBFlib_SOURCE_DIR}/examples" )
set(CBF__EXTERNAL_PACKAGES
"${CBFlib_SOURCE_DIR}/external_packages" )
set(CBF__DECTRIS_EXAMPLES
"${CBF__EXAMPLES}/dectris_cbf_template_test" )
#
# Directories on the build side
#
set(CBF__BLDSRC "${CBFlib_BINARY_DIR}/src" )
set(CBF__BLDEXMP "${CBFlib_BINARY_DIR}/src" )
set(CBF__BIN "${CBFlib_BINARY_DIR}/bin" )
set(CBF__LIB "${CBFlib_BINARY_DIR}/lib" )
set(CBF__BIN_INCLUDE "${CBFlib_BINARY_DIR}/include" )
set(CBF__SHARE "${CBFlib_BINARY_DIR}/share" )
set(CBF__EXT_PKG "${CBFlib_BINARY_DIR}/external_packages" )
set(CBF__DATA "${CBFlib_BINARY_DIR}/data_files" )
set(HDF5_PLUGIN_PATH ${CBF__LIB})
CBF_REQUIRE_DIRECTORY(${CBF__BLDSRC})
CBF_REQUIRE_DIRECTORY(${CBF__BLDEXMP})
CBF_REQUIRE_DIRECTORY(${CBF__BIN})
CBF_REQUIRE_DIRECTORY(${CBF__LIB})
CBF_REQUIRE_DIRECTORY(${CBF__BIN_INCLUDE})
CBF_REQUIRE_DIRECTORY(${CBF__SHARE})
CBF_REQUIRE_DIRECTORY(${CBF__EXT_PKG})
CBF_REQUIRE_DIRECTORY(${CBF__DATA})
# Version string and API version string -- obtained from cbf.h
# Extract the version components
file (READ ${CBFlib_SOURCE_DIR}/include/cbf.h CBFlib_cbf_h_contents)
string (REGEX REPLACE ".*#define[ \t]+CBF_VERS_MAJOR[ \t]+([0-9]*).*$"
"\\1" CBF_VERS_MAJOR ${CBFlib_cbf_h_contents})
CBF_DEBUG_MESSAGE( "MAJOR VERSION: ${CBF_VERS_MAJOR}")
string (REGEX REPLACE ".*#define[ \t]+CBF_VERS_MINOR[ \t]+([0-9]*).*$"
"\\1" CBF_VERS_MINOR ${CBFlib_cbf_h_contents})
CBF_DEBUG_MESSAGE( "MINOR VERSION: ${CBF_VERS_MINOR}")
string (REGEX REPLACE ".*#define[ \t]+CBF_VERS_RELEASE[ \t]+([0-9.]*).*$"
"\\1" CBF_VERS_RELEASE ${CBFlib_cbf_h_contents})
CBF_DEBUG_MESSAGE( "RELEASE: ${CBF_VERS_RELEASE}")
string (REGEX REPLACE ".*#define[ \t]+CBF_VERS_SUBRELEASE[ \t]+\"([0-9A-Za-z.]*)\".*$"
"\\1" CBF_VERS_SUBRELEASE ${CBFlib_cbf_h_contents})
CBF_DEBUG_MESSAGE( "SUBRELEASE: ${CBF_VERS_SUBRELEASE}")
# Extract the API version components
string (REGEX REPLACE ".*#define[ \t]+CBF_APIVERS_CUR[ \t]+([0-9]*).*$"
"\\1" CBF_APIVERS_CUR ${CBFlib_cbf_h_contents})
CBF_DEBUG_MESSAGE( "API VERSION: ${CBF_APIVERS_CUR}")
string (REGEX REPLACE ".*#define[ \t]+CBF_APIVERS_REV[ \t]+([0-9]*).*$"
"\\1" CBF_APIVERS_REV ${CBFlib_cbf_h_contents})
CBF_DEBUG_MESSAGE( "API REVISION: ${CBF_APIVERS_REV}")
string (REGEX REPLACE ".*#define[ \t]+CBF_APIVERS_AGE[ \t]+([0-9]*).*$"
"\\1" CBF_APIVERS_AGE ${CBFlib_cbf_h_contents})
CBF_DEBUG_MESSAGE( "API AGE: ${CBF_APIVERS_AGE}")
if(CBF_VERS_SUBRELEASE)
set (CBF_VERSION "${CBF_VERS_MAJOR}.${CBF_VERS_MINOR}.${CBF_VERS_RELEASE}-${CBF_VERS_SUBRELEASE}")
else(CBF_VERS_SUBRELEASE)
set (CBF_VERSION "${CBF_VERS_MAJOR}.${CBF_VERS_MINOR}.${CBF_VERS_RELEASE}")
endif(CBF_VERS_SUBRELEASE)
if(CBF_CMAKE_DEBUG)
message (STATUS "VERSION: ${CBF_VERSION}")
endif(CBF_CMAKE_DEBUG)
set (CBF_APIVERSION "${CBF_APIVERS_CUR}.${CBF_APIVERS_REV}.${CBF_APIVERS_AGE}")
CBF_DEBUG_MESSAGE( "APIVERSION: ${CBF_APIVERSION}")
set(JCBF "${CBFlib_SOURCE_DIR}/jcbf" CACHE STRING "")
set(JAVADIR "${CBFlib_SOURCE_DIR}/java" CACHE STRING "")
set(BIN "${CBFlib_BINARY_DIR}/bin" CACHE STRING "")
set(PYCBF "${CBFlib_SOURCE_DIR}/pycbf" CACHE STRING "")
set(EXAMPLES "${CBFlib_SOURCE_DIR}/examples" CACHE STRING "" )
set(DECTRIS_EXAMPLES "${EXAMPLES}/dectris_cbf_template_test" CACHE STRING "")
set(MINICBF_TEST "${CBFlib_SOURCE_DIR}/minicbf_test" CACHE STRING "")
set(GRAPHICS "${CBFlib_SOURCE_DIR}/html_graphics" CACHE STRING "")
#
# Definition to get a version of tifflib to support tiff2cbf
#
set(CBF_TIFF "tiff-4.0.3-rev-29Sep13")
set(TIFF_INSTALL_DIR "${CMAKE_BINARY_DIR}/${CBF_TIFF}")
#
# CQRlib
set(CBF_CQRLIB "cqrlib-1.1.4")
set(CBF_CQRLIB_URL "https://github.com/yayahjb/cqrlib/archive/refs/tags/CQRlib-1.1.4.tar.gz")
set(CQRLIB_INSTALL_DIR "${CMAKE_BINARY_DIR}/${CBF_CQRLIB}")
#
# Definitions to get a version of HDF5
#
set(CBF_HDF5 "hdf5-1.14.4-2")
set(CBF_HDF5URL "http://downloads.sf.net/cbflib/${CBF_HDF5}.tar.gz")
set(CBF_HDF5REGISTER_ARG "--register")
if (CBF_HDF5REGISTER_MANUAL_ENV STREQUAL "YES")
set(CBF_HDF5REGISTER_VAL "manual")
else (CBF_HDF5REGISTER_MANUAL_ENV STREQUAL "YES")
set(CBF_HDF5REGISTER_VAL "plugin")
endif (CBF_HDF5REGISTER_MANUAL_ENV STREQUAL "YES")
set(HDF5_EXTERNALLY_CONFIGURED 1)
set(HDF5_INSTALL_DIR "${CMAKE_BINARY_DIR}/${CBF_HDF5}")
set(HDF5_BINARY_DIR "${CBF_HDF5}/bin")
#
# Definitions to get a version of zlib
#
set(CBF_ZLIB "zlib-1.2.8")
set(CBF_ZLIBURL "http://downloads.sf.net/cbflib/${CBF_ZLIB}.tar.gz")
if(CBF_DONT_USE_LONG_LONG)
set(CBF_NOLLFLAG "-DCBF_DONT_USE_LONG_LONG")
else(CBF_DONT_USE_LONG_LONG)
set(CBF_NOLLFLAG "")
endif(CBF_DONT_USE_LONG_LONG)
#
# URLs from which to retrieve needed external package snapshots
#
# We give two REGEX packages, the old 1993 regex release for
# compatability with older CBFlib release Makefiles
# and a recent PCRE for use in the future. Only the PCRE
# version is used for cmake builds
#
set(CBF_REGEX "regex-20090805")
set(CBF_PCRE "pcre-8.33")
set(CBF_REGEXURL "http://downloads.sf.net/cbflib/${CBF_REGEX}.tar.gz")
set(CBF_PCREURL "http://downloads.sf.net/cbflib/${CBF_PCRE}.tar.gz")
set(CBF_TIFFURL "http://downloads.sf.net/cbflib/${CBF_TIFF}.tar.gz")
set(CBF_HDF5URL "http://downloads.sf.net/cbflib/${CBF_HDF5}.tar.gz")
#
# Get wget
#
find_program(WGET_EXECUTABLE wget)
CBF_DEBUG_MESSAGE( "WGET found at ${WGET_EXECUTABLE}")
#
# libm
set(libm "$<$<NOT:$<C_COMPILER_ID:MSVC>>:m>")
#
# ZLIB
#
find_package(ZLIB)
include(ExternalProject)
ExternalProject_Add(
${CBF_TIFF}
URL "${CBF_TIFFURL}"
SOURCE_DIR ${CMAKE_BINARY_DIR}/external_packages/${CBF_TIFF}
CMAKE_ARGS
-DCMAKE_BUILD_TYPE:STRING=RELEASE DEBUG
-DCMAKE_INSTALL_PREFIX:PATH=${TIFF_INSTALL_DIR}
-DCMAKE_INSTALL_RPATH:PATH=${TIFF_INSTALL_DIR}/lib
INSTALL_DIR ${CMAKE_BINARY_DIR}/${CBF_TIFF}
)
set(TIFF_LIBRARY_PATH ${TIFF_INSTALL_DIR}/lib/libtiff${CMAKE_SHARED_LIBRARY_SUFFIX})
ExternalProject_add(
${CBF_HDF5}
URL "${CBF_HDF5URL}"
SOURCE_DIR ${CMAKE_BINARY_DIR}/external_packages/${CBF_HDF5}
CMAKE_ARGS
-DCMAKE_BUILD_TYPE:STRING=RELEASE DEBUG
-DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=On
-DHDF5_BUILD_CPP_LIB:BOOL=Off
-DBUILD_SHARED_LIBS:BOOL=On
-DHDF5_BUILD_TOOLS:BOOL=On
-DHDF5_ENABLE_FORTRAN=${CBF_HDF5_ENABLE_FORTRAN}
-DCMAKE_INSTALL_PREFIX:PATH=${HDF5_INSTALL_DIR}
-DCMAKE_INSTALL_RPATH:PATH=${HDF5_INSTALL_DIR}/lib
INSTALL_DIR ${CMAKE_BINARY_DIR}/${CBF_HDF5}
)
# Cannot set INTERFACE_INCLUDE_DIRECTORIES on an imported target
# to a non-existent path: for now, create a directory now that
# will be populated during build.
file(MAKE_DIRECTORY "${HDF5_INSTALL_DIR}/include")
add_library(hdf5 SHARED IMPORTED)
add_dependencies(hdf5 ${CBF_HDF5})
set_target_properties(hdf5 PROPERTIES
IMPORTED_LOCATION "${HDF5_INSTALL_DIR}/lib/libhdf5${CMAKE_SHARED_LIBRARY_SUFFIX}"
INTERFACE_INCLUDE_DIRECTORIES "${HDF5_INSTALL_DIR}/include")
target_compile_definitions(hdf5
INTERFACE H5_USE_110_API)
#
# CQRlib
#
# If a cloned repository is patched, CMake seems to attempt to
# invoke PATCH_COMMAND on every run. For now, avoid automatically
# patching cloned repositories.
find_program(PATCH patch)
externalproject_add(${CBF_CQRLIB}
URL "${CBF_CQRLIB_URL}"
PATCH_COMMAND "${PATCH}"
-N -i "${CMAKE_CURRENT_SOURCE_DIR}/patches/cqrlib-1.1.4.patch" -p 1 -t
CMAKE_CACHE_ARGS
"-DCMAKE_BUILD_TYPE:STRING=${CMAKE_BUILD_TYPE}"
"-DCMAKE_INSTALL_BINDIR:PATH=${CQRLIB_INSTALL_DIR}/bin"
"-DCMAKE_INSTALL_INCLUDEDIR:PATH=${CQRLIB_INSTALL_DIR}/include"
"-DCMAKE_INSTALL_LIBDIR:PATH=${CQRLIB_INSTALL_DIR}/lib"
"-DCMAKE_INSTALL_PREFIX:PATH=${CQRLIB_INSTALL_DIR}")
file(MAKE_DIRECTORY "${CQRLIB_INSTALL_DIR}/include/cqrlib")
add_library(CQR SHARED IMPORTED)
add_dependencies(CQR ${CBF_CQRLIB})
set_target_properties(CQR PROPERTIES
IMPORTED_LOCATION "${CQRLIB_INSTALL_DIR}/lib/libCQRlib${CMAKE_SHARED_LIBRARY_SUFFIX}"
INTERFACE_INCLUDE_DIRECTORIES "${CQRLIB_INSTALL_DIR}/include")
#
# CBF_REGEX or CBF_PCRE
#
# Need to get:
# - an include directory
# - a library to link against
# - an (optional) dependency to build
#
# Try for PCRE first
find_library(CBF_REGEXLIB pcreposix)
find_path(CBF_REGEXLIB_INCLUDE_DIR NAMES pcreposix.h)
message(STATUS "CBF_REGEXLIB_INCLUDE_DIR for pcreposix.h = '${CBF_REGEXLIB_INCLUDE_DIR}'")
message(STATUS "CBF_REGEXLIB = '${CBF_REGEXLIB}'")
if (NOT CBF_REGEXLIB_INCLUDE_DIR OR NOT CBF_REGEXLIB)
# PCRE not found, try for REGEX
message(STATUS "'pcre' library not found")
find_library(CBF_REGEXLIB regex)
find_path(CBF_REGEXLIB_INCLUDE_DIR NAMES regex.h)
message(STATUS "CBF_REGEXLIB_INCLUDE_DIR for regex.h = '${CBF_REGEXLIB_INCLUDE_DIR}'")
message(STATUS "CBF_REGEXLIB = '${CBF_REGEXLIB}'")
if (NOT CBF_REGEXLIB_INCLUDE_DIR OR NOT CBF_REGEXLIB)
# Neither PCRE not REGEX found, load and build PCRE
message(STATUS "'regex' library not found")
ExternalProject_add(
PCRE
URL ${CBF_PCREURL}
SOURCE_DIR ${CMAKE_BINARY_DIR}/external_packages/${CBF_PCRE}
CMAKE_ARGS
-DCMAKE_BUILD_TYPE:STRING=RELEASE DEBUG
-DCMAKE_INSTALL_PREFIX:PATH=${CBFlib_BINARY_DIR}/${CBF_PCRE}
INSTALL_DIR ${CBFlib_BINARY_DIR}/${CBF_PCRE}
)
set(CBF_RE "PCRE")
set(CBF_REGEXLIB_INCLUDE_DIR ${CMAKE_BINARY_DIR}/${CBF_PCRE}/include)
set(CBF_REGEXLIB_LIBRARY_PATH ${CBFlib_BINARY_DIR}/${CBF_PCRE}/lib/libpcre.a)
add_definitions(-DCBF_REGEXLIB_PCRE)
else ()
set(CBF_RE "")
set(CBF_REGEXLIB_LIBRARY_PATH "${CBF_REGEXLIB}/libregex.so")
add_definitions(-DCBF_REGEXLIB_REGEX)
endif ()
else ()
add_library(pcreposix_static STATIC IMPORTED)
set_target_properties(pcreposix_static PROPERTIES
IMPORTED_LOCATION "${CBF_REGEXLIB}"
INTERFACE_INCLUDE_DIRECTORIES "${CBF_REGEXLIB_INCLUDE_DIR}")
find_library(_pcre_static pcre)
target_link_libraries(pcreposix_static INTERFACE "${_pcre_static}")
target_compile_definitions(pcreposix_static
INTERFACE CBF_REGEXLIB_PCRE)
set(_find_library_suffix_save "${CMAKE_FIND_LIBRARY_SUFFIX}")
set(CMAKE_FIND_LIBRARY_SUFFIXES ".dll" ".so")
find_library(_pcreposix_shared pcre)
add_library(pcreposix_shared SHARED IMPORTED)
set_target_properties(pcreposix_shared PROPERTIES
IMPORTED_LOCATION "${_pcreposix_shared}"
INTERFACE_INCLUDE_DIRECTORIES "${CBF_REGEXLIB_INCLUDE_DIR}")
target_compile_definitions(pcreposix_shared
INTERFACE CBF_REGEXLIB_PCRE)
set(CMAKE_FIND_LIBRARY_SUFFIX "${_find_library_suffix_save}")
endif ()
#
# Data Directories
#
set(CBF_DATADIRI "${CBF__DATA}/CBFlib_${CBF_VERSION}_Data_Files_Input" )
set(CBF_DATADIRO "${CBF__DATA}/CBFlib_${CBF_VERSION}_Data_Files_Output" )
set(CBF_DATADIRS "${CBF__DATA}/CBFlib_${CBF_VERSION}_Data_Files_Output_Sigs_Only")
#
# URLs from which to retrieve the data directories
#
set(CBF_DATAURLBASE "http://downloads.sf.net/cbflib")
set(CBF_DATAURLI "${CBF_DATAURLBASE}/CBFlib_${CBF_VERSION}_Data_Files_Input.tar.gz")
set(CBF_DATAURLO "${CBF_DATAURLBASE}/CBFlib_${CBF_VERSION}_Data_Files_Output.tar.gz")
set(CBF_DATAURLS "${CBF_DATAURLBASE}/CBFlib_${CBF_VERSION}_Data_Files_Output_Sigs_Only.tar.gz")
#
# Load and unpack the Data Files
#
CBF_LOAD_TARBALL(${CBF__DATA} ${CBF_DATADIRI} ${CBF_DATAURLI})
CBF_LOAD_TARBALL(${CBF__DATA} ${CBF_DATADIRO} ${CBF_DATAURLO})
CBF_LOAD_TARBALL(${CBF__DATA} ${CBF_DATADIRS} ${CBF_DATAURLS})
#
# Verify the checksums
#
file(GLOB CBF_DATADIRI_FILES "${CBF_DATADIRI}/*")
file(GLOB CBF_DATADIRO_FILES "${CBF_DATADIRO}/*")
foreach(loop_file ${CBF_DATADIRI_FILES} )
if (NOT "${loop_file}" MATCHES "[*.]md5")
file(MD5 "${loop_file}" loop_file_md5)
file(STRINGS "${loop_file}.md5" loop_file_md5_orig LIMIT_COUNT 1)
if (NOT ("${loop_file_md5}" STREQUAL "${loop_file_md5_orig}"))
message(WARNINH "loop_file: ${loop_file}:|${loop_file_md5}|${loop_file_md5_orig}|")
endif (NOT ("${loop_file_md5}" STREQUAL "${loop_file_md5_orig}"))
endif (NOT "${loop_file}" MATCHES "[*.]md5")
endforeach(loop_file)
foreach(loop_file ${CBF_DATADIRO_FILES} )
if (NOT "${loop_file}" MATCHES "[*.]md5")
file(MD5 "${loop_file}" loop_file_md5)
file(STRINGS "${loop_file}.md5" loop_file_md5_orig LIMIT_COUNT 1)
if (NOT ("${loop_file_md5}" STREQUAL "${loop_file_md5_orig}"))
message(WARNING "loop_file: ${loop_file}:|${loop_file_md5}|${loop_file_md5_orig}|")
endif (NOT ("${loop_file_md5}" STREQUAL "${loop_file_md5_orig}"))
endif (NOT "${loop_file}" MATCHES "[*.]md5")
endforeach(loop_file)
#
# Source files
#
set(
CBF_C_SOURCES
${CBF__SRC}/cbf.c
${CBF__SRC}/cbf_alloc.c
${CBF__SRC}/cbf_ascii.c
${CBF__SRC}/cbf_binary.c
${CBF__SRC}/cbf_byte_offset.c
${CBF__SRC}/cbf_canonical.c
${CBF__SRC}/cbf_codes.c
${CBF__SRC}/cbf_compress.c
${CBF__SRC}/cbf_context.c
${CBF__SRC}/cbf_copy.c
${CBF__SRC}/cbf_file.c
${CBF__SRC}/cbf_getopt.c
${CBF__SRC}/cbf_hdf5.c
${CBF__SRC}/cbf_hdf5_filter.c
${CBF__SRC}/cbf_lex.c
${CBF__SRC}/cbf_minicbf_header.c
${CBF__SRC}/cbf_nibble_offset.c
${CBF__SRC}/cbf_packed.c
${CBF__SRC}/cbf_predictor.c
${CBF__SRC}/cbf_read_binary.c
${CBF__SRC}/cbf_read_mime.c
${CBF__SRC}/cbf_simple.c
${CBF__SRC}/cbf_string.c
${CBF__SRC}/cbf_stx.c
${CBF__SRC}/cbf_tree.c
${CBF__SRC}/cbf_uncompressed.c
${CBF__SRC}/cbf_ulp.c
${CBF__SRC}/cbf_write.c
${CBF__SRC}/cbf_write_binary.c
${CBF__SRC}/cbf_ws.c
${CBF__SRC}/md5c.c
${CBF__SRC}/img.c
)
if (NOT (CBF_USE_FORTRAN_ENV STREQUAL "NO"))
set(
CBF_F90_BUILT_SOURCES
${CBF__BLDSRC}/fcb_exit_binary.f90
${CBF__BLDSRC}/fcb_next_binary.f90
${CBF__BLDSRC}/fcb_open_cifin.f90
${CBF__BLDSRC}/fcb_packed.f90
${CBF__BLDSRC}/fcb_read_bits.f90
${CBF__BLDSRC}/fcb_read_image.f90
${CBF__BLDSRC}/fcb_read_xds_i2.f90
)
set(
CBF_F90_SOURCES
${CBF__SRC}/fcb_atol_wcnt.f90
${CBF__SRC}/fcb_ci_strncmparr.f90
${CBF__SRC}/fcb_nblen_array.f90
${CBF__SRC}/fcb_read_byte.f90
${CBF__SRC}/fcb_read_line.f90
${CBF__SRC}/fcb_skip_whitespace.f90
)
endif (NOT (CBF_USE_FORTRAN_ENV STREQUAL "NO"))
# use, i.e. don't skip the full RPATH for the build tree
SET(CMAKE_SKIP_BUILD_RPATH FALSE)
# when building, don't use the install RPATH already
# (but later on when installing)
SET(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
SET(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/lib")
# add the automatically determined parts of the RPATH
# which point to directories outside the build tree to the install RPATH
SET(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
# the RPATH to be used when installing, but only if it's not a system directory
LIST(FIND CMAKE_PLATFORM_IMPLICIT_LINK_DIRECTORIES "${CMAKE_INSTALL_PREFIX}/lib" isSystemDir)
IF("${isSystemDir}" STREQUAL "-1")
SET(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/lib" )
ENDIF("${isSystemDir}" STREQUAL "-1")
#
# Header files
#
set(
CBF_HEADERS
${CBF__INCLUDE}/cbf.h
${CBF__INCLUDE}/cbf_alloc.h
${CBF__INCLUDE}/cbf_ascii.h
${CBF__INCLUDE}/cbf_binary.h
${CBF__INCLUDE}/cbf_byte_offset.h
${CBF__INCLUDE}/cbf_canonical.h
${CBF__INCLUDE}/cbf_codes.h
${CBF__INCLUDE}/cbf_compress.h
${CBF__INCLUDE}/cbf_context.h
${CBF__INCLUDE}/cbf_copy.h
${CBF__INCLUDE}/cbf_file.h
${CBF__INCLUDE}/cbf_getopt.h
${CBF__INCLUDE}/cbf_hdf5.h
${CBF__INCLUDE}/cbf_hdf5_filter.h
${CBF__INCLUDE}/cbf_lex.h
${CBF__INCLUDE}/cbf_minicbf_header.h
${CBF__INCLUDE}/cbf_nibble_offset.h
${CBF__INCLUDE}/cbf_packed.h
${CBF__INCLUDE}/cbf_predictor.h
${CBF__INCLUDE}/cbf_read_binary.h
${CBF__INCLUDE}/cbf_read_mime.h
${CBF__INCLUDE}/cbf_simple.h
${CBF__INCLUDE}/cbf_string.h
${CBF__INCLUDE}/cbf_stx.h
${CBF__INCLUDE}/cbf_tree.h
${CBF__INCLUDE}/cbf_uncompressed.h
${CBF__INCLUDE}/cbf_ulp.h
${CBF__INCLUDE}/cbf_write.h
${CBF__INCLUDE}/cbf_write_binary.h
${CBF__INCLUDE}/cbf_ws.h
${CBF__INCLUDE}/global.h
${CBF__INCLUDE}/cbff.h
${CBF__INCLUDE}/md5.h
${CBF__INCLUDE}/img.h
)
if (NOT (CBF_USE_FORTRAN_ENV STREQUAL "NO"))
#
# m4 FCB library macro files
#
set(
CBF_M4_FCB_DEFINES
${CBF__M4}/fcblib_defines.m4
)
set(
CBF_M4_FCB_FILES
${CBF__M4}/fcb_exit_binary.m4
${CBF__M4}/fcb_next_binary.m4
${CBF__M4}/fcb_open_cifin.m4
${CBF__M4}/fcb_packed.m4
${CBF__M4}/fcb_read_bits.m4
${CBF__M4}/fcb_read_image.m4
${CBF__M4}/fcb_read_xds_i2.m4
)
#
# m4 F90 examples macro files
#
set(
CBF_M4_F90_EXAMPLES
${CBF__M4}/test_fcb_read_image.m4
${CBF__M4}/test_xds_binary.m4
)
endif (NOT (CBF_USE_FORTRAN_ENV STREQUAL "NO"))
#
# Documentation files
#
set(
CBF_DOCUMENTS
${CBF__DOC}/CBFlib.html
${CBF__DOC}/CBFlib.txt
${CBF__DOC}/CBFlib_NOTICES.html
${CBF__DOC}/CBFlib_NOTICES.txt
${CBF__DOC}/ChangeLog
${CBF__DOC}/ChangeLog.html
${CBF__DOC}/MANIFEST
${CBF__DOC}/gpl.txt $(DOC)/lgpl.txt
CACHE STRING ""
)
#
# HTML Graphics files
#
set(
JPEGS
${GRAPHICS}/CBFbackground.jpg
${GRAPHICS}/CBFbig.jpg
${GRAPHICS}/CBFbutton.jpg
${GRAPHICS}/cbflibbackground.jpg
${GRAPHICS}/cbflibbig.jpg
${GRAPHICS}/cbflibbutton.jpg
${GRAPHICS}/cifhome.jpg
${GRAPHICS}/iucrhome.jpg
${GRAPHICS}/noticeButton.jpg
CACHE STRING ""
)
# Set up the necessary includes
include_directories(
BEFORE SYSTEM
${CBFlib_SOURCE_DIR}/include
${CBFlib_BINARY_DIR}/${CBF_TIFF}/include
)
set(CMAKE_RUNTIME_OUTPUT_DIRECTORY "${CBFlib_BINARY_DIR}/bin")
#
# Build the static and shared CBF libraries
#
set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY "${CBFlib_BINARY_DIR}/lib")
set(CMAKE_LIBRARY_OUTPUT_DIRECTORY "${CBFlib_BINARY_DIR}/lib")
add_library(cbf_static STATIC ${CBF_C_SOURCES})
add_dependencies(cbf_static ${CBF_TIFF})
set_target_properties(cbf_static PROPERTIES OUTPUT_NAME "cbf")
set_target_properties(cbf_static PROPERTIES LINKER_LANGUAGE C)
set_target_properties(cbf_static PROPERTIES SOVERSION "${CBF_APIVERSION}")
target_link_libraries(cbf_static
PUBLIC hdf5
PRIVATE pcreposix_static
PRIVATE ${libm})
set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY "${CBFlib_BINARY_DIR}/lib")
set(CMAKE_LIBRARY_OUTPUT_DIRECTORY "${CBFlib_BINARY_DIR}/lib")
add_library(cbf_shared SHARED ${CBF_C_SOURCES})
add_dependencies(cbf_shared ${CBF_TIFF})
set_target_properties(cbf_shared PROPERTIES OUTPUT_NAME "cbf")
set_target_properties(cbf_shared PROPERTIES LINKER_LANGUAGE C)
set_target_properties(cbf_shared PROPERTIES SOVERSION "${CBF_APIVERSION}")
target_link_libraries(cbf_shared
PUBLIC hdf5
PRIVATE pcreposix_shared
PRIVATE ${libm})
#
# Build the static and shared IMG libraries
#
set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY "${CBFlib_BINARY_DIR}/lib")
add_library(img_static STATIC ${CBF__SRC}/img.c)
set_target_properties(img_static PROPERTIES OUTPUT_NAME "img")
set_target_properties(img_static PROPERTIES LINKER_LANGUAGE C)
set(IMG_STATIC_LIBRARY_PATH ${CBFlib_BINARY_DIR}/lib/libimg.a)
set(CMAKE_LIBRARY_OUTPUT_DIRECTORY "${CBFlib_BINARY_DIR}/lib")
add_library(img_shared SHARED ${CBF__SRC}/img.c)
set_target_properties(img_shared PROPERTIES OUTPUT_NAME "img")
set_target_properties(img_shared PROPERTIES LINKER_LANGUAGE C)
target_link_libraries(img_shared hdf5)
set(IMG_SHARED_LIBRARY_PATH ${CBFlib_BINARY_DIR}/lib/libimg.so)
if (NOT (CBF_USE_FORTRAN_ENV STREQUAL "NO"))