diff --git a/Changelog.md b/Changelog.md
index 66ea9dd1eb..0593c18c64 100644
--- a/Changelog.md
+++ b/Changelog.md
@@ -3,6 +3,7 @@
 
 ## 3.9.48
 - General: Fix a bug where directory traversal could fail if the user does not have permission to read a directory ([#1508](https://github.com/fossas/fossa-cli/pull/1508)).
+- Performance: Fix timeout issues when uploading large numbers of license scans by processing them in smaller batches ([#1509](https://github.com/fossas/fossa-cli/pull/1509)).
 
 ## 3.9.47
 - Licensing: Adds support for Zeebe Community License v1.1 and Camunda License v1.0
diff --git a/src/Control/Carrier/FossaApiClient/Internal/FossaAPIV1.hs b/src/Control/Carrier/FossaApiClient/Internal/FossaAPIV1.hs
index 0068375888..69e36d9bad 100644
--- a/src/Control/Carrier/FossaApiClient/Internal/FossaAPIV1.hs
+++ b/src/Control/Carrier/FossaApiClient/Internal/FossaAPIV1.hs
@@ -179,11 +179,13 @@ import Fossa.API.Types (
   SignedURLWithKey (surlwkKey, surlwkSignedURL),
   TokenTypeResponse,
   UploadResponse,
+  chunkArchiveComponents,
   useApiOpts,
  )
 
 import Control.Effect.Reader
 import Data.Foldable (traverse_)
+import Data.List.Extra (chunk)
 import Fossa.API.CoreTypes qualified as CoreTypes
 import Network.HTTP.Client (responseStatus)
 import Network.HTTP.Client qualified as C
@@ -652,24 +654,25 @@ uploadNativeContainerScan apiOpts ProjectRevision{..} metadata scan =
     (baseUrl, baseOpts) <- useApiOpts apiOpts
     let locator = renderLocator $ Locator "custom" projectName (Just projectRevision)
         opts =
-          "locator" =: locator
+          baseOpts
+            <> "locator" =: locator
             <> "cliVersion" =: cliVersion
             <> "managedBuild" =: True
             <> maybe mempty ("branch" =:) projectBranch
             <> "scanType" =: ("native" :: Text)
             <> mkMetadataOpts metadata projectName
 
-        uploadScan url containerScan = req POST url (ReqBodyJson containerScan) jsonResponse (baseOpts <> opts)
-        sparkleAnalysisUrl = containerUploadUrl Sparkle baseUrl
-
-    resp <-
-      ( warnOnErr @Text "Container scan upload to new analysis service failed, falling back to core analysis."
-          . errCtx ("Upload to new analysis service at " <> renderUrl sparkleAnalysisUrl)
-          $ uploadScan sparkleAnalysisUrl scan
-      )
-        <||> context "Upload to CORE analysis service" (uploadScan (containerUploadUrl Core baseUrl) scan)
-
+    resp <- uploadToSparkle baseUrl opts <||> uploadToCore baseUrl opts
     pure $ responseBody resp
+  where
+    uploadScan url opts containerScan = req POST url (ReqBodyJson containerScan) jsonResponse opts
+    sparkleAnalysisUrl = containerUploadUrl Sparkle
+    coreAnalysisUrl = containerUploadUrl Core
+    uploadToSparkle baseUrl opts =
+      warnOnErr @Text "Container scan upload to new analysis service failed, falling back to core analysis."
+        . errCtx ("Upload to new analysis service at " <> renderUrl (sparkleAnalysisUrl baseUrl))
+        $ uploadScan (sparkleAnalysisUrl baseUrl) opts scan
+    uploadToCore baseUrl opts = context "Upload to CORE analysis service" $ uploadScan (coreAnalysisUrl baseUrl) opts scan
 
 -- | Replacement for @Data.HTTP.Req.req@ that additionally logs information about a request in a debug bundle.
 req ::
@@ -1015,8 +1018,9 @@ licenseScanFinalize ::
   ArchiveComponents ->
   m ()
 licenseScanFinalize apiOpts archiveProjects = do
-  _ <- licenseScanFinalize' apiOpts archiveProjects
-  pure ()
+  -- The latency for scans with hundreds of license scans is way too high, leading to spurious error messages.
+  -- https://fossa.atlassian.net/browse/ANE-2272
+  traverse_ (licenseScanFinalize' apiOpts) $ chunkArchiveComponents 100 archiveProjects
 
 licenseScanFinalize' ::
   APIClientEffs sig m =>
@@ -1580,12 +1584,18 @@ finalizePathDependencyScan ::
   m (Maybe ())
 finalizePathDependencyScan apiOpts locators forceRebuild = runEmpty $
   fossaReqAllow401 $ do
+    -- The latency for scans with hundreds of license scans is way too high, leading to spurious error messages.
+    -- Reference: https://fossa.atlassian.net/browse/ANE-2272
+    --
+    -- No similar issue was reported for this method,
+    -- but since it uses the same methodology I decided it was better to go ahead and do it.
     (baseUrl, baseOpts) <- useApiOpts apiOpts
-    let req' = PathDependencyFinalizeReq locators forceRebuild
-    _ <-
+    traverse_ (finalize baseUrl baseOpts) $ chunk 100 locators
+  where
+    mkReq locs = PathDependencyFinalizeReq locs forceRebuild
+    finalize baseUrl baseOpts locs =
       context "Queuing a build for all license scan uploads" $
-        req POST (pathDependencyFinalizeUrl baseUrl) (ReqBodyJson req') ignoreResponse (baseOpts)
-    pure ()
+        req POST (pathDependencyFinalizeUrl baseUrl) (ReqBodyJson (mkReq locs)) ignoreResponse (baseOpts)
 
 alreadyAnalyzedPathRevisionURLEndpoint :: Url 'Https -> Locator -> Url 'Https
 alreadyAnalyzedPathRevisionURLEndpoint baseUrl locator = baseUrl /: "api" /: "cli" /: "path_dependency_scan" /: renderLocator locator /: "analyzed"
diff --git a/src/Data/List/Extra.hs b/src/Data/List/Extra.hs
index b764da93ec..a17134d0fd 100644
--- a/src/Data/List/Extra.hs
+++ b/src/Data/List/Extra.hs
@@ -2,6 +2,7 @@ module Data.List.Extra (
   (!?),
   head',
   singleton,
+  chunk,
 ) where
 
 import Data.Maybe (listToMaybe)
@@ -21,3 +22,11 @@ head' = listToMaybe
 -- | Create a one-item list from the item given
 singleton :: a -> [a]
 singleton = (: [])
+
+-- | Chunk the list into a list of lists.
+-- If chunk size is 0 or lower, returns a single chunk containing the entire list.
+chunk :: Int -> [a] -> [[a]]
+chunk _ [] = []
+chunk size as
+  | size <= 0 = [as]
+  | otherwise = take size as : chunk size (drop size as)
diff --git a/src/Fossa/API/Types.hs b/src/Fossa/API/Types.hs
index 1b0b14f21a..50935f7d80 100644
--- a/src/Fossa/API/Types.hs
+++ b/src/Fossa/API/Types.hs
@@ -44,6 +44,7 @@ module Fossa.API.Types (
   defaultApiPollDelay,
   blankOrganization,
   orgFileUpload,
+  chunkArchiveComponents,
 ) where
 
 import App.Fossa.Lernie.Types (GrepEntry)
@@ -66,7 +67,7 @@ import Data.Aeson (
 import Data.Coerce (coerce)
 import Data.Function (on)
 import Data.List (sort, sortBy)
-import Data.List.Extra ((!?))
+import Data.List.Extra (chunk, (!?))
 import Data.Map.Strict (Map)
 import Data.Map.Strict qualified as Map
 import Data.Maybe (catMaybes, fromMaybe)
@@ -149,6 +150,14 @@ data ArchiveComponents = ArchiveComponents
   }
   deriving (Eq, Ord, Show)
 
+-- | Split the @ArchiveComponents@ into chunks of the given size.
+-- If chunk size is 0 or lower, returns a single chunk containing the entire list.
+chunkArchiveComponents :: Int -> ArchiveComponents -> [ArchiveComponents]
+chunkArchiveComponents chunkSize ArchiveComponents{..} = map mkComponent $ chunk chunkSize archiveComponentsArchives
+  where
+    mkComponent :: [Archive] -> ArchiveComponents
+    mkComponent as = ArchiveComponents as archiveComponentsRebuild archiveComponentsUpload
+
 instance ToJSON ArchiveComponents where
   toJSON ArchiveComponents{..} =
     object