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jmfernandezjmfernandez
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Removed indirect GPLv3+ dependency which was fetched as an optional jsonschema dependency.
Also, updated the version tag and copyright year in headers.
1 parent cf6294c commit f260476

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-19
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‎CITATION.cff

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@@ -9,7 +9,7 @@ authors:
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given-names: Adrián
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orcid: "https://orcid.org/0000-0001-7517-5065"
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cff-version: 1.2.0
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date-released: "2022-05-20"
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date-released: "2022-06-01"
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identifiers:
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- description: WfExS-backend release in Zenodo
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type: doi
@@ -22,4 +22,4 @@ message: "If you use this software, please cite it using these metadata."
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repository-code: "https://github.com/inab/WfExS-backend"
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type: software
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title: "WfExS-backend"
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version: 0.5.3
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version: 0.5.4

‎WfExS-backend.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎WfExS-config-replicator.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎requirements.txt

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pyyaml
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jsonpath-ng
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jsonschema[format] >= 3.0.0
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jsonschema[format_nongpl] >= 3.0.0
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paramiko[ed25519]
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certifi
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crypt4gh

‎wfexs_backend/__init__.py

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__license__ = 'Apache 2.0'
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# https://www.python.org/dev/peps/pep-0396/
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__version__ = '0.5.3'
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__version__ = '0.5.4'
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def describeGitRepo(repo):
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"""Describe the repository version.

‎wfexs_backend/container.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/docker_container.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/encrypted_fs.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/fetchers/__init__.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/fetchers/git.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/fetchers/pride.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/fetchers/s3.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/fetchers/trs_files.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/nextflow_engine.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/podman_container.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/utils/docker.py

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#!/usr/bin/env python3
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

‎wfexs_backend/utils/ftp_downloader.py

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#!/usr/bin/env python3
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# limitations under the License.
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# Code from this class is an iteration of
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#
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# https://github.com/bigpe/FtpDownloader/blob/891bee35566078531b6f1ed3975627e29b935a97/ftp_downloader/FTPDownloader.py
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#
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# which was following MIT license
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#
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# https://github.com/bigpe/ftp-downloader/blob/891bee35566078531b6f1ed3975627e29b935a97/LICENSE.txt
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import asyncio
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import datetime

‎wfexs_backend/utils/marshalling_handling.py

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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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# Copyright 2020-2021 Barcelona Supercomputing Center (BSC), Spain
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# Copyright 2020-2022 Barcelona Supercomputing Center (BSC), Spain
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.

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