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setup.py
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#!/usr/bin/env python
import os
from setuptools import find_packages, setup
here = os.path.abspath(os.path.dirname(__file__))
version = {}
with open(os.path.join(here, "spec2vec", "__version__.py")) as f:
exec(f.read(), version)
with open("README.rst") as readme_file:
readme = readme_file.read()
setup(
name="spec2vec",
version=version["__version__"],
description="Word2Vec based similarity measure of mass spectrometry data.",
long_description=readme,
long_description_content_type="text/x-rst",
author="Spec2Vec developer team",
author_email="florian.huber@hs-duesseldorf.de",
url="https://github.com/iomega/spec2vec",
packages=find_packages(),
include_package_data=True,
license="Apache Software License 2.0",
zip_safe=False,
keywords=[
"word2vec",
"mass spectrometry",
"fuzzy matching",
"fuzzy search"
],
classifiers=[
"Development Status :: 4 - Beta",
"Intended Audience :: Education",
"Intended Audience :: Science/Research",
"Intended Audience :: Developers",
"License :: OSI Approved :: Apache Software License",
"Natural Language :: English",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.7",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
],
test_suite="tests",
python_requires='>=3.7',
install_requires=[
"gensim >=4.2.0",
"matchms >=0.14.0,<=0.26.4",
"numba >=0.51",
"numpy",
"scipy <=1.10.1",
"tqdm",
],
extras_require={"dev": ["bump2version",
"isort>=5.1.0",
"pylint<2.12.0",
"prospector[with_pyroma]",
"pytest",
"pytest-cov",
"sphinx>=4.0.0",
"sphinx_rtd_theme",
"sphinxcontrib-apidoc",
"yapf",],
}
)