Repositories list

• CSV-to-FCS

  Public
  A short script for converting .csv file data into an .fcs file, and vise versa.

  R

  •16•17•2•1•Updated Apr 2, 2021Apr 2, 2021

• tSNEplots

  Public
  An R script for automatically creating coloured tSNE plots

  R

  •5•7•1•0•Updated Apr 2, 2021Apr 2, 2021

• Spectre

  Public
  A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry data.

  R

  •

  MIT License

  •22•2•0•0•Updated Mar 10, 2021Mar 10, 2021

• CATALYST

  Public
  Cytometry dATa anALYsis Tools

  R

  •31•0•0•0•Updated Nov 25, 2019Nov 25, 2019

• CytoTools

  Public
  Useful small scripts for cytometry data management

  R

  •

  MIT License

  •3•3•0•0•Updated Jul 29, 2019Jul 29, 2019

• CAPX

  Public
  Cytometry analysis pipeline for large and complex datasets (CAPX) (beta)

  tsnecytometry-datacytometry-analysis-pipeline

  R

  •

  MIT License

  •6•4•1•0•Updated Jul 12, 2019Jul 12, 2019

• IMC-ROI-annotation

  Public
  An R script to facilitate the annotation and modification of Imaging Mass Cytometry (IMC) ROI data

  R

  •0•0•0•0•Updated Jul 3, 2019Jul 3, 2019

• AutoGraph

  Public
  A looped script to create a series of group comparison bar graphs or dot plots

  R

  •0•2•0•0•Updated Jun 2, 2019Jun 2, 2019

• Chronoclust

  Public
  Python

  •

  GNU General Public License v3.0

  •4•0•0•0•Updated Mar 27, 2019Mar 27, 2019

• cytofWorkflow

  Public
  Package Homepage: http://bioconductor.org/packages/devel/bioc/html/cytofWorkflow.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=cytofWorkflow

  6•1•0•0•Updated Jan 7, 2019Jan 7, 2019

• Adaptable-RtSNE

  Public
  A script to utilise the flexibility of a modifiable RtSNE package.

  R

  •0•0•1•0•Updated Oct 11, 2017Oct 11, 2017

• spillover-spreading-calculator

  Public
  A brief script for calculating spillover-spreading error from one fluorophore into a non-target detector

  R

  •0•1•0•0•Updated Jun 24, 2017Jun 24, 2017