Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update README.md #56

Merged
merged 1 commit into from
Aug 1, 2024
Merged

Update README.md #56

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
6 changes: 3 additions & 3 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
# pic-sure-gic-institution

Sites must deploy a Virtual Machine inside the security boundary of their institution with the following requirements: <br>
<b>Operating system requirement:</b> Centos 7.x
<b>Operating system requirement:</b> Any modern Linux operating system with good Docker support. We test on Alma Linux 8.7
<p><b>Minimum resources required for the application:</b> 8 cores and 32GB RAM
<p><b>Resources for loading data:</b> The resources required to load the data are determined based on the attributes of the data (number of patients, metadata per patient, annotations, etc.) and the mechanism to load the data (CSV, RDS). <br>

Expand All @@ -27,7 +27,7 @@ Using the CSV loader may result in more resources being needed.
## PIC-SURE Installation<br>
For additonal information about PIC-SURE and prerequisites for using the All-in-one click [here](https://github.com/hms-dbmi/pic-sure-all-in-one "here")

<b> Steps to install on a fresh Centos 7 installation:</b>
<b> Steps for installing on a fresh server with Docker installed:</b>

1. Install Git

Expand All @@ -41,7 +41,7 @@ For additonal information about PIC-SURE and prerequisites for using the All-in-

`cd pic-sure-all-in-one/initial-configuration`

`sudo ./install-dependencies.sh`
`sudo ./install-dependencies-docker.sh`

4. Browse to Jenkins server
Point your browser at your server's IP on port `8080`.
Expand Down