ALS-7737: Better support for splitting genomic data by chromosome#137

Merged

ramari16 merged 26 commits intomainfrom ALS-7737

Mar 21, 2025

Commits on Feb 14, 2025

Create VCFIndexBulider, add logging to NewVcfLoader
ramari16
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Commits on Feb 24, 2025

ALS-7737: Refactor NewVCFLoader to better support running in parallel
ramari16
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Commits on Feb 26, 2025

ALS-7737: Add VcfLoader that splits by chromosome. todo: variant metadata in a similar fashion
ramari16
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ALS-7737: Add VariantMetadataLoader that loads per chromosome
ramari16
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Commits on Feb 27, 2025

Commits on Feb 28, 2025

ALS-7737: Cleanup hard to follow loops
ramari16
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Commits on Mar 3, 2025

Update build references for new vcf loader
ramari16
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Commits on Mar 4, 2025

Commits on Mar 10, 2025

Update variant metadata loader implementaton
ramari16
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Commits on Mar 13, 2025

Commits on Mar 14, 2025

Commits on Mar 17, 2025

Fix string == bug that was actually working
ramari16
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Commits on Mar 18, 2025

Fix integration tests
ramari16
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Commits on Mar 20, 2025

Commits on Mar 21, 2025

ALS-7737: Set gic site spring param
ramari16
committed