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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 354 152

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 23 14

Repositories

Showing 10 of 418 repositories
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 6 BSD-3-Clause 2 50 4 Updated Mar 6, 2025
  • bmtk Public

    Brain Modeling Toolkit

    AllenInstitute/bmtk’s past year of commit activity
    Python 285 BSD-3-Clause 91 60 9 Updated Mar 6, 2025
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 25 9 288 11 Updated Mar 6, 2025
  • aibs-informatics-cdk-lib Public

    Library for AWS CDK Constructs related to AIBS Informatics Services

    AllenInstitute/aibs-informatics-cdk-lib’s past year of commit activity
    Python 1 0 0 1 Updated Mar 5, 2025
  • aibs-informatics-aws-lambda Public

    AWS Lambda library for AIBS Informatics lambda functions

    AllenInstitute/aibs-informatics-aws-lambda’s past year of commit activity
    Python 1 0 0 0 Updated Mar 6, 2025
  • np_notebooks Public
    AllenInstitute/np_notebooks’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Mar 6, 2025
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    AllenInstitute/vis’s past year of commit activity
    TypeScript 5 BSD-3-Clause 0 0 6 Updated Mar 5, 2025
  • ACE Public

    R Shiny app for comparison of annotations (e.g., cell type assignments)

    AllenInstitute/ACE’s past year of commit activity
    R 1 1 10 (1 issue needs help) 0 Updated Mar 4, 2025
  • deep-neurographs Public

    A Python package that corrects split mistakes in a fragmented neuron segmentation using a graph neural network.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Python 3 MIT 0 0 0 Updated Mar 4, 2025
  • jem Public

    Repository containing JEM (JSON Electrophysiology Metadata), a web-form for logging metadata during slice electrophysiology experiments.

    AllenInstitute/jem’s past year of commit activity
    HTML 3 3 0 0 Updated Mar 4, 2025
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