o GraphDRP parsl csa workflow #6

	name: Docker Parsl GraphDRP CSA workflow
	on: [push]
	jobs:
	test:
	runs-on: ubuntu-latest
	container:
	image: rajeeja/graphdrp-image:latest
	steps:
	- uses: actions/checkout@v4
	- name: Install missing libraries
	run: \|
	apt-get update && apt-get install -y libxrender1 libxext6
	- name: Install and check
	run: \|
	which python
	python --version
	which conda
	conda env list
	eval "$(conda shell.bash hook)" # Ensure Conda is properly initialized
	conda activate graphdrp
	pip install -e .
	export PYTHONPATH=$PYTHONPATH:.
	python -c "from improvelib.applications.drug_response_prediction.config import DRPPreprocessConfig; print('Import successful')"
	BASE_DIR=$(pwd)
	ls -ltrh
	cd /app/GraphDRP
	ls -ltrh
	conda list -n graphdrp
	python -c "import sys; print(sys.path)"
	cd $BASE_DIR/workflows/csa/parsl/
	pip install cryptography==37.0.1
	pip install pyopenssl==22.0.0
	pip install cffi==1.14.5
	pip install parsl numpy pandas scikit-learn pyyaml
	mv /app/GraphDRP/csa_data .
	echo "Preprocess started"
	ls -ltrh
	python workflow_preprocess.py --config_file ./parsl_csa_githubactions.ini
	echo "Preprocess done"
	python workflow_csa.py --config_file ./parsl_csa_githubactions.ini
	echo "Parsl CSA done"

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