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hotfix/bedgraph #242

Merged
merged 3 commits into from
Nov 24, 2019
Merged

hotfix/bedgraph #242

merged 3 commits into from
Nov 24, 2019

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CiaranOMara
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This PR prevents detect_bedgraph from unnecessarily parsing whole files by adding constraints that need to be overcome to allow the scan for bedGraph magic bytes to continue.

My apologies for the speed issues that detect_bedgraph has caused.

Fixes #241.

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codecov bot commented Nov 24, 2019

Codecov Report

Merging #242 into master will increase coverage by 0.78%.
The diff coverage is 100%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #242      +/-   ##
==========================================
+ Coverage    80.1%   80.89%   +0.78%     
==========================================
  Files           7        7              
  Lines         367      382      +15     
==========================================
+ Hits          294      309      +15     
  Misses         73       73
Impacted Files Coverage Δ
src/registry.jl 92.64% <100%> (+2.08%) ⬆️

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@timholy timholy merged commit 9e6d49d into JuliaIO:master Nov 24, 2019
@CiaranOMara CiaranOMara deleted the hotfix/bedgraph branch April 29, 2020 06:24
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Successfully merging this pull request may close these issues.

detect_bedgraph function leads to extreme delays as loader attempts to scan entire file
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