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@Multiomics-Analytics-Group

Multi-omics Network Analytics Group

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  1. course_protein_language_modeling course_protein_language_modeling Public

    Jupyter Notebook 32 8

  2. MicW2Graph MicW2Graph Public

    A knowledge graph of the wastewater treatment microbiome and its biological context

    HTML 4

  3. pubmed-rag pubmed-rag Public

    A playground for RAG development from pubmed API

    Jupyter Notebook 3 1

  4. vuegen vuegen Public

    VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply …

    Python 2

  5. course_synthetic_biology_data course_synthetic_biology_data Public

    Slides for lecture "Leveraging existing biological data and making sense of it" part of DTU's Summer School on Synthetic Biology for Cell Factories

    2

  6. ckg ckg Public

    Forked from MannLabs/CKG

    Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge disco…

    Jupyter Notebook 1

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Showing 10 of 20 repositories
  • vuegen Public

    VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.

    Multiomics-Analytics-Group/vuegen’s past year of commit activity
    Python 2 MIT 0 13 4 Updated Mar 4, 2025
  • Retrieve_info_MGnifyAPI Public

    Scripts to get information from MGnify programmatically using its API

    Multiomics-Analytics-Group/Retrieve_info_MGnifyAPI’s past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated Mar 2, 2025
  • nf-vuegen Public

    Nextflow and nf-core scripts for VueGen

    Multiomics-Analytics-Group/nf-vuegen’s past year of commit activity
    Nextflow 0 0 0 0 Updated Feb 28, 2025
  • acore Public

    Statistical functions to analyse multi-omics data

    Multiomics-Analytics-Group/acore’s past year of commit activity
    Python 0 0 10 2 Updated Feb 21, 2025
  • vuecore Public

    Visualization library for omics data

    Multiomics-Analytics-Group/vuecore’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Feb 4, 2025
  • FermentDB Public

    FermentDB: A Database for High-cell Density Fermentations

    Multiomics-Analytics-Group/FermentDB’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Jan 29, 2025
  • ckg Public Forked from MannLabs/CKG

    Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge discovery making use of all the information contained in the graph

    Multiomics-Analytics-Group/ckg’s past year of commit activity
    Jupyter Notebook 1 MIT 104 0 0 Updated Jan 21, 2025
  • multiomics-analytics-group.github.io Public Forked from poole/hyde

    MoNA Group Website

    Multiomics-Analytics-Group/multiomics-analytics-group.github.io’s past year of commit activity
    HTML 0 4,039 0 0 Updated Jan 17, 2025
  • course_graph_machine_learning Public

    This is part of an AI course

    Multiomics-Analytics-Group/course_graph_machine_learning’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Jan 13, 2025
  • Multiomics-Analytics-Group/course_protein_language_modeling’s past year of commit activity
    Jupyter Notebook 32 Apache-2.0 8 0 0 Updated Jan 10, 2025

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