Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Dynamic background correction #99

Merged
merged 11 commits into from
Sep 13, 2023
Merged

Dynamic background correction #99

merged 11 commits into from
Sep 13, 2023

Conversation

mca-sh
Copy link
Collaborator

@mca-sh mca-sh commented Aug 23, 2023

Fixes #93

  • Background correction method Dark coord only could be used to calculate and subtract background trajectories. It is now possible to calculate background trajectories using any of the proposed method, simply by activation the option dynamic in panel Background.
  • Background correction method Dark coord was sometimes finding dark coordinates overlapping with non-targetted single molecule signal. This is now improved by looking for the minimum intensity value instead of median.

@mca-sh mca-sh added new functionality add a new functionality to MASH-FRET bugfix Bugs were fixed documentation Concerns documentation updates improvement Improve existing functionalities, scripts or workflow and removed bugfix Bugs were fixed labels Aug 23, 2023
@mca-sh mca-sh merged commit 1fd523b into master Sep 13, 2023
@mca-sh mca-sh deleted the dynamic-bg-corr branch November 28, 2023 10:18
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
documentation Concerns documentation updates improvement Improve existing functionalities, scripts or workflow new functionality add a new functionality to MASH-FRET
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Background-corrected trajectories drop below zero
1 participant