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Abstraction of chemical reaction networks and extraction of minimum autocatalytic cycles

This repository implements a method to abstract chemical reaction networks (CRNs) and extract minimum autocatalytic cycles (MACs).

Usage

Run a_main_NWabs.m contained in 'NWabs' for the abstraction of CRNs.

Run a_main_findACs.m contained in 'findACs' for the extraction of MACs.

Requirements

Optimization Toolbox of MATLAB is needed for the extraction of MACs.

Citation

If you find our paper or this code useful or relevant to your work please consider citing us.

Y. Ito et. al., "  " (To be updated).

In bibtex format:

 (To be updated)

License

See the LICENSE file for details.

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