A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as t…

Synteny and Rearrangement Identifier

Zen-Knit is a formal (PDF), informal (HTML) report generator for data analyst and data scientist who wants to use python. RMarkdown Alternative for Python

Create beautiful, publication-quality books and documents from computational content.

Use multipass to create a docker instance for macOS

🏔 coverage extraction from BAM/CRAM files, supporting targets 📊  

A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

⚡ Dynamically generated stats for your github readmes

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

goeBURST in python

Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly

Bioinformatics containers

🔬 De novo assembly of nanopore reads using nextflow

Bayesian inference of ancestral dates on bacterial phylogenetic trees

Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)

User management lib for Phoenix Framework

Ultrafast de novo assembly for long noisy reads (though having no consensus step)

Converts profiling output to a dot graph.

An easy extension for Paperclip to crop your image uploads using jCrop.

Ultra-fast and memory-efficient (meta-)genome assembler

Real-time tracking of influenza evolution

Assembly by Reduced Complexity (ARC)

This is a gametemplate for LÖVE engine using middleclass, stateful, love-loader, TESound and cron libraries.

Lua Koans, minus the Zen stuff

Object-orientation for Lua

A DSL for data-driven computational pipelines

A native macOS KeePass client

Guide your users through a tour of your app

private member portal for churches, built with Ruby on Rails