Optimize memory utilization of get_structure().
#861
cloverzizitest_and_deploy.yml
on: pull_request
Build CCD and wheel for reusing it in several CI jobs
4m 57s
Generate wheels matrix
12s
Check code style
16s
Build source distribution
25s
Test interfaces to databases and applications
6m 48s
Test interface to Muscle 5
56s
Matrix: Build & Test
Upload documentation to GitHub Releases and documentation website
0s
Upload package to GitHub Releases & PyPI
0s
Annotations
16 errors and 5 warnings
|
Test interfaces to databases and applications
Process completed with exit code 1.
|
|
Run benchmarks
Error: failed to execute the benchmark process
|
|
Run benchmarks
Process completed with exit code 1.
|
|
Build & Test (cp311-macosx_x86_64, macos-latest)
Command ['arch', '-x86_64', '/bin/sh', '-c', 'pytest /Users/runner/work/biotite/biotite --durations=50 --ignore=/Users/runner/work/biotite/biotite//tests//sequence//align//test_statistics.py --ignore=/Users/runner/work/biotite/biotite//tests//application --ignore=/Users/runner/work/biotite/biotite//tests//interface --ignore=/Users/runner/work/biotite/biotite//tests//database --ignore=/Users/runner/work/biotite/biotite//tests//test_doctest.py --ignore=/Users/runner/work/biotite/biotite//tests//test_modname.py\n'] failed with code 1.
|
|
Build & Test (cp311-macosx_x86_64, macos-latest)
Process completed with exit code 1.
|
|
Build & Test (cp313-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp311-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp310-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp312-win_amd64, windows-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp313-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp310-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp312-macosx_x86_64, macos-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp313-macosx_x86_64, macos-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp310-macosx_x86_64, macos-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp312-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Build & Test (cp311-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-macosx_x86_64_macos" failed.
|
|
Test interface to Muscle 5
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
|
|
Test interfaces to databases and applications
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
|
|
Test interfaces to databases and applications
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
|
|
Build documentation
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
|
|
Build documentation
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
|
Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
|
ccd
|
33.8 MB |
|
|
documentation
|
75.5 MB |
|
|
internal-build
|
50.2 MB |
|
|
release-cp310-macosx_arm64
|
37.2 MB |
|
|
release-cp311-macosx_arm64
|
37.2 MB |
|
|
release-cp312-macosx_arm64
|
37.2 MB |
|
|
release-cp313-macosx_arm64
|
37.2 MB |
|
|
release-sdist
|
34.3 MB |
|