Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Consider packaging / distribution for 2.0 (maybe using a Conda recipe) #38

Open
brettc opened this issue Feb 5, 2015 · 2 comments
Open

Comments

@brettc
Copy link
Owner

brettc commented Feb 5, 2015

PF 2.0 moves away from the "batteries included" approach in PF 1.0, as we dependencies on various packages (numpy etc), and we might also require building a cython extension. Python packaging is notoriously crappy, so we could consider anaconda packaging as a supported solution. ie. Download anaconda; use "conda install partfinder2".

@cmayer
Copy link

cmayer commented Feb 5, 2015

Hi Brett,

in principle Anaconda worked fine for me when I tried it.

If I understand correctly, Anaconda will not be required if all packages are already installed, but it is an additional
supported solution?

Best
Christoph

Am 05.02.2015 um 20:14 schrieb Brett Calcott:

PF 2.0 moves away from the "batteries included" approach in PF 1.0, as we dependencies on various packages (numpy etc), and we might also require building a cython extension. Python packaging is notoriously crappy, so we could consider anaconda packaging as a supported solution. ie. Download anaconda; use "conda install partfinder2".


Reply to this email directly or view it on GitHub.


Dr. Christoph Mayer
Email: c.mayer.zfmk@uni-bonn.de
Tel.: +49 (0)228 9122 403

Zoologisches Forschungsmuseum Alexander Koenig

  • Leibniz Institut für Biodiversität der Tiere -
    Adenauerallee 160
    53113 Bonn, Germany
    www.zfmk.de

Stiftung des öffentlichen Rechts; Direktor: Prof. J. W. Wägele
Sitz: Bonn


@brettc
Copy link
Owner Author

brettc commented Feb 5, 2015

I'm just talking about providing an easy way for someone to install PF 2.0, by using the Anaconda packaging system, perhaps one that we might explicitly support.

Q: "PF 2.0 does NOT run on my foobar linux systems cluster with custom compiled python and random packages installed"

A: Install anaconda python. Run "conda install pf2".

Of course, PF2 should run easily enough on other installations. But that often depends on the know how of the users.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants