iREAD-v0.8.9

Added a script combine_ir_expr_into_matrix.py along with demo data to combine intron expression of multiple samples into a table/matrix.

iREAD-v0.8.7

Added -s and -m options to specify number of threads and memory, respectively.

iREAD-v0.8.6

Added the -q option to specify the code to extract uniquely mapped reads. By default -q is set to 255 for BAM generated with BAM. For BAM generated by other tools such as HISAT, change the value of -q accordingly.
Adjusted criteria to count intronic reads.
Fixed minor bugs/typos.

iREAD-v0.8.5

All introns are output no matter they are retained or not; parallelization implemented.