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LTLA committed Jun 25, 2024
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<tr id="row_0_" class="even"><td class="entry"><span style="width:0px;display:inline-block;">&#160;</span><span id="arr_0_" class="arrow" onclick="toggleFolder('0_')">&#9660;</span><span class="icona"><span class="icon">N</span></span><a class="el" href="namespacescran.html" target="_self">scran</a></td><td class="desc">Methods for single-cell analysis </td></tr>
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13 changes: 8 additions & 5 deletions docs/fit__variance__trend_8hpp.html
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">scran::fit_variance_trend::Options</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight">Parameter defaults for trend fitting. <a href="structscran_1_1fit__variance__trend_1_1Options.html#details">More...</a><br /></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structscran_1_1fit__variance__trend_1_1Workspace.html">scran::fit_variance_trend::Workspace&lt; Float_ &gt;</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="structscran_1_1fit__variance__trend_1_1Workspace.html" title="Workspace for compute().">Workspace</a> for <code><a class="el" href="namespacescran_1_1fit__variance__trend.html#ab8296a4054e4eb94a44864c1ad47d53a" title="Fit a mean-variance trend to log-count data.">compute()</a></code>. <a href="structscran_1_1fit__variance__trend_1_1Workspace.html#details">More...</a><br /></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structscran_1_1fit__variance__trend_1_1Results.html">scran::fit_variance_trend::Results&lt; Float_ &gt;</a></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="structscran_1_1fit__variance__trend_1_1Results.html" title="Results of fit_variance_trend::compute().">Results</a> of <code><a class="el" href="namespacescran_1_1fit__variance__trend.html#ad9c43577a87c767d7d2d58ce770cd63c" title="Fit a mean-variance trend to log-count data.">fit_variance_trend::compute()</a></code>. <a href="structscran_1_1fit__variance__trend_1_1Results.html#details">More...</a><br /></td></tr>
<tr class="memdesc:"><td class="mdescLeft">&#160;</td><td class="mdescRight"><a class="el" href="structscran_1_1fit__variance__trend_1_1Results.html" title="Results of fit_variance_trend::compute().">Results</a> of <code><a class="el" href="namespacescran_1_1fit__variance__trend.html#ab8296a4054e4eb94a44864c1ad47d53a" title="Fit a mean-variance trend to log-count data.">fit_variance_trend::compute()</a></code>. <a href="structscran_1_1fit__variance__trend_1_1Results.html#details">More...</a><br /></td></tr>
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</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a id="func-members" name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:ad9c43577a87c767d7d2d58ce770cd63c" id="r_ad9c43577a87c767d7d2d58ce770cd63c"><td class="memTemplParams" colspan="2">template&lt;<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">typename</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> &gt; </td></tr>
<tr class="memitem:ad9c43577a87c767d7d2d58ce770cd63c"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">void</a>&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacescran_1_1fit__variance__trend.html#ad9c43577a87c767d7d2d58ce770cd63c">scran::fit_variance_trend::compute</a> (<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">size_t</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">n</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">mean</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">variance</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *fitted, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *residuals, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Options</a> &amp;<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">options</a>)</td></tr>
<tr class="memdesc:ad9c43577a87c767d7d2d58ce770cd63c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Fit a mean-variance trend to log-count data. <br /></td></tr>
<tr class="separator:ad9c43577a87c767d7d2d58ce770cd63c"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ab8296a4054e4eb94a44864c1ad47d53a" id="r_ab8296a4054e4eb94a44864c1ad47d53a"><td class="memTemplParams" colspan="2">template&lt;<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">typename</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> &gt; </td></tr>
<tr class="memitem:ab8296a4054e4eb94a44864c1ad47d53a"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">void</a>&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacescran_1_1fit__variance__trend.html#ab8296a4054e4eb94a44864c1ad47d53a">scran::fit_variance_trend::compute</a> (<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">size_t</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">n</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">mean</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">variance</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *fitted, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *residuals, <a class="el" href="structscran_1_1fit__variance__trend_1_1Workspace.html">Workspace</a>&lt; <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> &gt; &amp;<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">workspace</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Options</a> &amp;<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">options</a>)</td></tr>
<tr class="memdesc:ab8296a4054e4eb94a44864c1ad47d53a"><td class="mdescLeft">&#160;</td><td class="mdescRight">Fit a mean-variance trend to log-count data. <br /></td></tr>
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<tr class="memitem:aa4769d5f59810f4a8b7b8c13a84675ca" id="r_aa4769d5f59810f4a8b7b8c13a84675ca"><td class="memTemplParams" colspan="2">template&lt;<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">typename</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> &gt; </td></tr>
<tr class="memitem:aa4769d5f59810f4a8b7b8c13a84675ca"><td class="memTemplItemLeft" align="right" valign="top"><a class="el" href="structscran_1_1fit__variance__trend_1_1Results.html">Results</a>&lt; <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacescran_1_1fit__variance__trend.html#aa4769d5f59810f4a8b7b8c13a84675ca">scran::fit_variance_trend::compute</a> (<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">size_t</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">n</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">mean</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Float_</a> *<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">variance</a>, <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">const</a> <a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">Options</a> &amp;<a class="el" href="structscran_1_1fit__variance__trend_1_1Options.html">options</a>)</td></tr>
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