Use uv #128
Workflow file for this run
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| name: Tests | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| workflow_dispatch: | |
| jobs: | |
| ruff: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| enable-cache: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: "pyproject.toml" | |
| - run: uv sync --all-extras --dev | |
| - run: uv run ruff check src/ tests/ docs/source/ examples/ | |
| mypy: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| enable-cache: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: "pyproject.toml" | |
| - run: uv sync --all-extras --dev | |
| - run: uv run mypy src/ tests/ docs/source/ examples/ | |
| ruff-format: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| enable-cache: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: "pyproject.toml" | |
| - run: uv sync --all-extras --dev | |
| - run: uv run ruff format --check src/ tests/ docs/source/ examples/ | |
| pytest: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| enable-cache: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: "pyproject.toml" | |
| - run: uv sync --all-extras --dev | |
| - run: uv run pytest | |
| doctest: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| enable-cache: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: "pyproject.toml" | |
| - run: uv sync --all-extras --dev | |
| - run: uv run make -C docs doctest | |
| from-sdf-example: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| enable-cache: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: "pyproject.toml" | |
| - run: uv sync --all-extras --dev | |
| - run: | | |
| uv run examples/from_sdf.py data/molecules.sdf test-atomlite.db | |
| test -f test-atomlite.db | |
| read-database-example: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| enable-cache: true | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version-file: "pyproject.toml" | |
| - run: uv sync --all-extras --dev | |
| - run: uv run examples/read_database.py data/atomlite.db |