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arabidopsis-thaliana

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Gregor-Mendel-Institute / aradeepopsis

A versatile, fully open-source pipeline to extract phenotypic measurements from plant images

deep-learning nextflow tensorflow scikit-image semantic-segmentation plant-phenotyping arabidopsis-thaliana

Updated Nov 7, 2022
Nextflow

nschan / nf-genomeassembly

Nextflow pipeline to assemble genomes from long reads.

nanopore annotation genome nextflow pacbio scaffolding genome-sequencing oxford-nanopore genome-assembly long-reads arabidopsis hifi long-read-sequencing arabidopsis-thaliana nextflow-pipeline nextflow-pipelines pacbio-hifi-sequencing-reads

Updated Nov 6, 2024
Nextflow

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