fungal

Here are 4 public repositories matching this topic...

JTFouquier / ghost-tree

creating hybrid-gene phylogenetic trees for diversity analyses

python diversity bioinformatics python3 phylogenetic-trees phylogenetics microbiology microbiome fungi fungal microbial-ecology

Updated Aug 23, 2022
Python

AshrithSagar / Classification-Fungal10x

Star

Fungal classification at 10x resolution. Multiple Instance Learning (MIL)

deep-learning tensorflow classification binary-classification fungal multiple-instance-learning

Updated Jul 27, 2024
Python

akshayparopkari / discover_tfbs

Star

Discover transcription factor (TF) binding specificities/sites (TFBS) using binding site motif sequence and structural information.

python bash machine-learning bioinformatics transcription-factors r pathogen biology scripting computational-biology binding-sites fungal biofilm candida-albicans

Updated Jun 17, 2024
Python

FunDiSPipe is a comprehensive bioinformatics pipeline designed for the Fungal Diversity Survey (FunDiS), specifically tailored for analyzing fungal ITS data from Oxford Nanopore Technologies sequencing.

genetics fungal barcoding

Updated Apr 14, 2024
Python

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