GitHub - verdurin/fedora-rpms: RPM Packaging work for Fedora

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Name	Name	Last commit message	Last commit date
Latest commit verdurin Add more details for circos Apr 22, 2016 c29b271 · Apr 22, 2016 History 143 Commits
ChIPseeqer-qmake-qt4-Makefile.patch	ChIPseeqer-qmake-qt4-Makefile.patch	Add ChIPseeqer spec and patches	Aug 10, 2011
ChIPseeqer-qmake-qt4.patch	ChIPseeqer-qmake-qt4.patch	Add ChIPseeqer spec and patches	Aug 10, 2011
ChIPseeqer.spec	ChIPseeqer.spec	ChIPseeqer changes	Aug 11, 2011
EMAN2.sh	EMAN2.sh	Rename to EMAN2 and various path fixes; start of EPEL5 work	Jun 24, 2011
EMAN2.spec	EMAN2.spec	Rename to EMAN2 and various path fixes; start of EPEL5 work	Jun 24, 2011
MACS.spec	MACS.spec	Make files section more specific and remove EPEL-specific macros	Oct 9, 2011
R-AnnotationDbi.spec	R-AnnotationDbi.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-ArrayExpress.spec	R-ArrayExpress.spec	ArrayExpressHTS work from 16th June 2011	Jun 20, 2011
R-ArrayExpressHTS.spec	R-ArrayExpressHTS.spec	ArrayExpressHTS work from 16th June 2011	Jun 20, 2011
R-DESeq.spec	R-DESeq.spec	ArrayExpressHTS work from 16th June 2011	Jun 20, 2011
R-RBGL.spec	R-RBGL.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-RColorBrewer.spec	R-RColorBrewer.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-RCurl.spec	R-RCurl.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-ROCR.spec	R-ROCR.spec	Fix files section for R-ROCR	Nov 22, 2011
R-Rgraphviz.spec	R-Rgraphviz.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-Rmpi.spec	R-Rmpi.spec	Add various missing specs	Nov 25, 2011
R-Rsamtools.spec	R-Rsamtools.spec	Add missing R specs	Jun 24, 2011
R-SciViews.spec	R-SciViews.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-ShortRead.spec	R-ShortRead.spec	Add missing R specs	Jun 24, 2011
R-SparseM.spec	R-SparseM.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-XML.spec	R-XML.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-akima.spec	R-akima.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-annotate.spec	R-annotate.spec	Update R-annotate to latest upstream	Oct 14, 2011
R-biomaRt.spec	R-biomaRt.spec	ArrayExpressHTS work from 16th June 2011	Jun 20, 2011
R-gam.spec	R-gam.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-gdata.spec	R-gdata.spec	Remove unwanted Perl reqs.	Oct 14, 2011
R-genefilter.spec	R-genefilter.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-geneplotter.spec	R-geneplotter.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-gplots.spec	R-gplots.spec	Initial version of R-gplots	Nov 22, 2011
R-graph.spec	R-graph.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-gtools.spec	R-gtools.spec	%%files fixes for R-gtools	Oct 14, 2011
R-hwriter.spec	R-hwriter.spec	Add missing R specs	Jun 24, 2011
R-limma.spec	R-limma.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-lpSolve.spec	R-lpSolve.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-mclust.spec	R-mclust.spec	More minor fixes for R-mclust	Oct 14, 2011
R-mix.spec	R-mix.spec	First building version of R-mix	Oct 14, 2011
R-nws.spec	R-nws.spec	Add various missing specs	Nov 25, 2011
R-puma.spec	R-puma.spec	Initial version of R-puma	Nov 22, 2011
R-pumadata-circular-dependency-fix.patch	R-pumadata-circular-dependency-fix.patch	Add R-pumadata-circular-dependency-fix.patch	Oct 14, 2011
R-pumadata.spec	R-pumadata.spec	First working R-pumadata version	Oct 14, 2011
R-rlecuyer.spec	R-rlecuyer.spec	Add various missing specs	Nov 25, 2011
R-rpvm.spec	R-rpvm.spec	Add various missing specs	Nov 25, 2011
R-rsprng.spec	R-rsprng.spec	Add various missing specs	Nov 25, 2011
R-sampling.spec	R-sampling.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
R-snow.spec	R-snow.spec	Add various missing specs	Nov 25, 2011
R-svSocket.spec	R-svSocket.spec	Add missing R specs	Jun 24, 2011
R-xtable.spec	R-xtable.spec	Add R-ArrayExpressHTS spec and dependencies	May 10, 2011
README	README	Add README	May 2, 2011
Send2Trash3k.spec	Send2Trash3k.spec	Add Send2Track3k	Jun 18, 2011
SeqAn.spec	SeqAn.spec	Add Boost BR for SeqAn	Jan 30, 2012
analysis.spec	analysis.spec	add missing Boost BR for analysis	Nov 22, 2011
bamtools.spec	bamtools.spec	Add bamtools	Jun 30, 2011
boost141-cufflinks-boost-header-files.patch	boost141-cufflinks-boost-header-files.patch	EPEL cufflinks version	May 17, 2011
boost141-cufflinks.spec	boost141-cufflinks.spec	Boost141-cufflinks 1.0.3 update	Jun 6, 2011
bowtie-script-shebang.patch	bowtie-script-shebang.patch	Add bowtie	Jun 27, 2011
bowtie.spec	bowtie.spec	Bowtie fixes from review	Jun 27, 2011
bowtie2.spec	bowtie2.spec	Add bowtie2	Jan 9, 2012
bustle.spec	bustle.spec	Add bustle	Jun 26, 2011
circos-0.69.2-1.spec	circos-0.69.2-1.spec	Add more details for circos	Apr 22, 2016
circos.spec	circos.spec	Add initial version of circos	Mar 18, 2016
cufflinks-bam-header.patch	cufflinks-bam-header.patch	EPEL cufflinks version	May 17, 2011
cufflinks-bin.spec	cufflinks-bin.spec	Add various missing specs	Nov 25, 2011
cufflinks-boost-thread.patch	cufflinks-boost-thread.patch	EPEL cufflinks version	May 17, 2011
cufflinks-boost141-header-files.patch	cufflinks-boost141-header-files.patch	EPEL cufflinks version	May 17, 2011
cufflinks-boost141-headers.patch	cufflinks-boost141-headers.patch	EPEL cufflinks version	May 17, 2011
cufflinks.spec	cufflinks.spec	Update cufflinks to 1.3.0	Jan 30, 2012
din-build.patch	din-build.patch	Update din to 1.9.2	Jan 11, 2012
din-include.patch	din-include.patch	Update din to 3.5, include desktop file and icon	Aug 22, 2012
din-libs.patch	din-libs.patch	Update din to 3.5, include desktop file and icon	Aug 22, 2012
din.spec	din.spec	Update din to 3.5, include desktop file and icon	Aug 22, 2012
drFAST.spec	drFAST.spec	drFAST and din updates	Jul 29, 2011
drfast.spec	drfast.spec	drFAST and din updates	Jul 29, 2011
dupeGuru-ME.spec	dupeGuru-ME.spec	Add more dupeguru-related specs	Jun 20, 2011
eman2-bin.sh	eman2-bin.sh	eman2-bin updates	Dec 12, 2011
eman2-bin.spec	eman2-bin.spec	eman2-bin updates	Dec 12, 2011
eman2-boost-include.patch	eman2-boost-include.patch	Add eman2 patch	Jun 24, 2011
eman2.spec	eman2.spec	Tophat 1.3.1	Jun 28, 2011
fastq_screen-README.Fedora	fastq_screen-README.Fedora	Add README for fastq_screen	Aug 10, 2011
fastq_screen.spec	fastq_screen.spec	Fix inclusion of README.Fedora in fastq_screen	Aug 19, 2011
filo.spec	filo.spec	Filo and din updates for latest upstreams	Jun 24, 2011
gnome-boxes.spec	gnome-boxes.spec	add gnome-boxes	Dec 2, 2011
gzstream.spec	gzstream.spec	gzstream changes	Jul 1, 2011
hscommon.spec	hscommon.spec	Add more dupeguru-related specs	Jun 20, 2011
jobprogress.spec	jobprogress.spec	Add Send2Track3k	Jun 18, 2011
lemon-library.spec	lemon-library.spec	Add various missing specs	Nov 25, 2011
libircclient-strictaliasing-dcc.patch	libircclient-strictaliasing-dcc.patch	Strict aliasing fixes for libircclient	Jan 11, 2012
libircclient-strictaliasing.patch	libircclient-strictaliasing.patch	Strict aliasing fixes for libircclient	Jan 11, 2012
libircclient.spec	libircclient.spec	Update for 1.5 and remove GCC 4.7 patches	Jan 30, 2012
liblemon.spec	liblemon.spec	Add various missing specs	Nov 25, 2011
libsequence.spec	libsequence.spec	Remove upstream spec cruft for libsequence	Sep 12, 2011
locfit.spec	locfit.spec	Add various missing specs	Nov 25, 2011
mmseq-flags.patch	mmseq-flags.patch	Add mmseq patches	May 27, 2011
mmseq-sam-header.patch	mmseq-sam-header.patch	Add mmseq patches	May 27, 2011
mmseq-zlib.patch	mmseq-zlib.patch	Add mmseq patches	May 27, 2011
mmseq.spec	mmseq.spec	Update mmseq to 0.9.11	May 28, 2011
mothur-bin.spec	mothur-bin.spec	Add mothur-bin	Aug 22, 2011
mothur-makefile.patch	mothur-makefile.patch	Mothur updates	Aug 22, 2011
mothur.spec	mothur.spec	First working version of Mothur	Aug 26, 2011
musicguru.spec	musicguru.spec	add new specs	Jun 18, 2011
perl-makefile-vcfstats.patch	perl-makefile-vcfstats.patch	Add patches from Jack Tanner for vcftools 0.1.5 upstream changes	May 2, 2011
picard-tools-bin.spec	picard-tools-bin.spec	Add various missing specs	Nov 25, 2011
picard-tools.spec	picard-tools.spec	Working version of picard-tools	Aug 26, 2011
pybedtools.spec	pybedtools.spec	First building version of pybedtools.spec	Nov 25, 2011
sprng2.spec	sprng2.spec	Add various missing specs	Nov 25, 2011
sra.spec	sra.spec	Add sra_sdk and sra, version 2.1.0 update	Jul 15, 2011
sra_sdk-binary.spec	sra_sdk-binary.spec	Add sra_sdk-binary	Aug 1, 2011
sra_sdk.spec	sra_sdk.spec	Update sra_sdk to 2.1.2	Aug 1, 2011
sratoolkit.spec	sratoolkit.spec	Updated sratoolkit.spec for sratoolkit 2.1.8.	Dec 16, 2011
srma.spec	srma.spec	Initial release of srma	Aug 11, 2011
tabix.spec	tabix.spec	Make tabix use Fedora CFLAGS	Nov 22, 2011
tophat-binary.spec	tophat-binary.spec	Add tophat-binary	Aug 11, 2011
tophat-sam-header.patch	tophat-sam-header.patch	Update Tophat to 1.4.0 and fix samtools patch	Jan 30, 2012
tophat.spec	tophat.spec	Update Tophat to 1.4.0 and fix samtools patch	Jan 30, 2012
ucsc-tools.spec	ucsc-tools.spec	Update ucsc-tools to v260 and fix ugly build hack	Jan 11, 2012
ultrascan3.spec	ultrascan3.spec	SeqAn and ultraspec3	Jul 4, 2011
vcftools-perl-makefile.patch	vcftools-perl-makefile.patch	Update vcftools to 0.1.7	Jan 11, 2012
vcftools.spec	vcftools.spec	Final version of vcftools before Fedora upload	Jul 29, 2012
yoshimi-fltk13.patch	yoshimi-fltk13.patch	Add patch from Brendan Jones to fix compilation with FLTK 1.3 for yos…	Aug 29, 2011
yoshimi.spec	yoshimi.spec	Update Yoshimi to 1.0.0	Aug 22, 2012

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